Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05832 ATGGCTTCCATTTCATGGTTCAGCAGCTCTCTTCACATCCGACCAACAGCCTCTGCCAGGGACAAAGGTTTATCATCTCCTATAACTGTGGAATATCATAAAACAACAAGACCACAATTACTTTCTTCCTTGGAAGAAGGACTTACTGTGAATAGAAGACAACTGATTCTTTACACAGCCACAACAGCAATTGTGGTGCCGTCTACTGTCTCCAATGCATTGGCACTCAATGATGTGTCCGAGGATTTTAGTATCTACACCGACGATGAGAACAAGTTCAAGATAGAGATTCCTCAAGAGTGGCAAATAGGAACAGGAGAATCTGCAGGGTTTAAATCATTAACTGCTTTCTACCCGAAAGAGGAATCTAATTCCAATGTGAGCGTCGTGATCACAGGGGTAGGACCGGATTTCACTAAGATGGAATCATTCGGCAAAGTTGAAGAATTTGCTGATACTCTGGTTAGTGGATTGGACAGAAGCTGGAAAAAACCACCTGGTGTTGCTGCTAAACTGATAGATTGTAAATCATCTAAAGGATTTTATTTCATCGAGTATACGCTGCAAAATCCTGGTGAGAATCGCAAACATCTATATTCAGCTATTGGGATGTTAACAAATGGCTGGTATAACAGACTGTATACAGTGACAGGACAGTATGGGGATGAGGAAACAGACAAATATGCTTCCAAAGTTCAGAAGGCGGTTCGATCGTTTAAGTTCACATAA 729 0.4143 MASISWFSSSLHIRPTASARDKGLSSPITVEYHKTTRPQLLSSLEEGLTVNRRQLILYTATTAIVVPSTVSNALALNDVSEDFSIYTDDENKFKIEIPQEWQIGTGESAGFKSLTAFYPKEESNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAKLIDCKSSKGFYFIEYTLQNPGENRKHLYSAIGMLTNGWYNRLYTVTGQYGDEETDKYASKVQKAVRSFKFT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05832 242 Pfam PsbP 82 241 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Trre5g05832 242 SUPERFAMILY Mog1p/PsbP-like 83 241 IPR016123 -
Trre5g05832 242 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 74 241 - -
Trre5g05832 242 PANTHER - 34 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05832 Trre-Chr5 58022104 58023950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05832 - - lja:Lj1g3v3404330.1 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05832 5 58022104 58023950 Trre5g05832 5 58022104 58023950 ECH