Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre5g05827 | ATGAAAGGTGCGGTTCTTGTTGCTATAGCGGCTTCCATTGGGAATTTTCTTCAGGGATGGGATAATGCTACCATTGCTGGTTCCATTCTTTACATTAAGAAAGATCTTGCTTTGCAAACAACAATGGAAGGGCTTGTGGTGGCAATGTCCCTCATTGGAGCTACAGTCATCACAACTTGCTCTGGTCCTGTATCAGATTGGCTTGGTCGAAGACCAATGTTGATAATCTCATCCGTGCTATATTTCTTGGGTGGTTTGGTTATGTTGTGGTCTCCTAATGTATATGTCTTGTGCTTAGCAAGACTACTTGATGGATTTGGTATTGGCCTTGCCGTGACTCTTGTTCCGGTTTATATATCTGAGACTGCCCCCTCCGATATAAGGGGATCCTTAAATACACTTCCCCAGTTCAGCGGTTCTGGAGGAATGTTCTTATCATACTGTATGGTGTTTGGGATGTCATTGACCGCCTCACCTAGCTGGAGAGTAATGCTTGGGGTTCTTTCAATTCCTTCTCTCTTCTATTTTATATTGACGGTATTTTTCTTGCCCGAGTCTCCTCGGTGGCTCGTGAGTAAAGGAAAGATGCTGGAGGCTAAAAAGGTTCTCCAAAGATTACGTGGCCAAGATGATGTGTCAGGTGAGATGGCATTGCTGGTTGAAGGTCTCGGGATTGGAGGTGATGCATCTATAGAAGAGTACATAATAGGTCCAGGTGACGAGGTGGCAGATGGTCATGAACAAACAACAGAGAAAGACAAAATCCGGTTATATGGATCTCAAGCAGGCCTTTCTTGGTTAGCAAAACCTGTAACTGGACAGAGTTCTCTTGGTCTTGGCCTTGTGTCACGCCATGGAAGCCTTGCCATGGATCCTCTTGTGACCTTATTTGGCAGCGTTCACGAGAAGTTCCCTGAGACAGGAAGCAAGGGAAGCGCTTTGTTTCCGACTTTTGGAAGCATGTTCAGCACAGCTGATCCTCATATTAAAAATGAACATTGGGATGAAGAGAGCCTGCAAAGAGAAGGTGAGGACTATTTGTCAGATGGTGCTGCTGGGGACTCTGATGACAATTTGCATAGTCCTTTAATCTCACGCCAAACAACAAGCCTTGAAAAAGACTTGCCTCCTCCTCCTCCTTCCCATGGCAGTTTGCTGAATAACATTAGGCGCCACAGTAGTCTTATGCAAGAATCAGGTGAGCCAGTTGGTAATACCGGTATTGGTGGTGGTTGGCAGCTTGCATGGAAATGGTCTGGAAAAGGTGAGGATGGAAAAAAGCAAGGAGAATTTAAAAGGATTTATTTGCATGAGGAGGGAGTCTCTGGATCTCGACGTGGATCCATGGTATCAATTCCCGGTGAAGGTGACTTTGTCCAGGCAGCTGCCTTGGTTAGCCAACCTGCTCTTTTCTCCAAGGAGCTAATTGGTGAACAGCCAGTTGGGCCTGCAATGGTTCACCCATCTAAAACTGCTTCAAAAGGGCCCATTTGGGAGGCTCTACTTGAACCAGGGGTCAAGCATGCATTGGTTGTAGGGATTGGAATACAACTTCTTCAGCAGTTTTCGGGGATTAATGGGGTTCTATACTACACTCCTCAAATCCTTGAAGAGGCTGGTGTTGCAGTTCTTCTTTCAGATTTGGGCCTTAGCTCAACTTCTTCATCTTTTCTTATAAGTGCTCTCACAACCTTATTGATGCTTCCTAGTATCGGCTTAGCCATGAGGCTTATGGATGTCACGGGTAGAAGGCAATTACTACTTGTCACAATTCCAGTGCTGATAGTGTCACTTGTTATATTGATCATTGGAAGCGTAGTAAATTTTGGCAGTGTTGTCCATGCAGCGATCTCAACTGTATGCGTCATAGTTTATTTTTGCTTCTTTGTTATGGGTTATGGACCAATCCCAAACATCCTTTGCGCAGAGATTTTCCCCACTAGAGTGCGTGGGCTCTGCATTGCTATCTGCGCCTTAGTGTTCTGGATTGGAGACATCATTGTCACATATTCGCTGCCTGTGATGCTCAGTACTTTAGGATTGGCAGGCGTCTTCGGTGTTTACGCAGTTGTGTGTGTCATATCCTTGGTATTTGTGTATCTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATTACTGAATTCTTTTCTGTTGGTTCAAGGCAGGCTGAAGCAGCCAAGAATGAGTGA | 2196 | 0.4531 | MKGAVLVAIAASIGNFLQGWDNATIAGSILYIKKDLALQTTMEGLVVAMSLIGATVITTCSGPVSDWLGRRPMLIISSVLYFLGGLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSDIRGSLNTLPQFSGSGGMFLSYCMVFGMSLTASPSWRVMLGVLSIPSLFYFILTVFFLPESPRWLVSKGKMLEAKKVLQRLRGQDDVSGEMALLVEGLGIGGDASIEEYIIGPGDEVADGHEQTTEKDKIRLYGSQAGLSWLAKPVTGQSSLGLGLVSRHGSLAMDPLVTLFGSVHEKFPETGSKGSALFPTFGSMFSTADPHIKNEHWDEESLQREGEDYLSDGAAGDSDDNLHSPLISRQTTSLEKDLPPPPPSHGSLLNNIRRHSSLMQESGEPVGNTGIGGGWQLAWKWSGKGEDGKKQGEFKRIYLHEEGVSGSRRGSMVSIPGEGDFVQAAALVSQPALFSKELIGEQPVGPAMVHPSKTASKGPIWEALLEPGVKHALVVGIGIQLLQQFSGINGVLYYTPQILEEAGVAVLLSDLGLSSTSSSFLISALTTLLMLPSIGLAMRLMDVTGRRQLLLVTIPVLIVSLVILIIGSVVNFGSVVHAAISTVCVIVYFCFFVMGYGPIPNILCAEIFPTRVRGLCIAICALVFWIGDIIVTYSLPVMLSTLGLAGVFGVYAVVCVISLVFVYLKVPETKGMPLEVITEFFSVGSRQAEAAKNE | 731 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre5g05827 | 731 | MobiDBLite | consensus disorder prediction | 334 | 362 | - | - | |
| Trre5g05827 | 731 | PRINTS | Sugar transporter signature | 520 | 530 | IPR003663 | GO:0016020|GO:0022857|GO:0055085 | |
| Trre5g05827 | 731 | PRINTS | Sugar transporter signature | 642 | 654 | IPR003663 | GO:0016020|GO:0022857|GO:0055085 | |
| Trre5g05827 | 731 | PRINTS | Sugar transporter signature | 15 | 25 | IPR003663 | GO:0016020|GO:0022857|GO:0055085 | |
| Trre5g05827 | 731 | PRINTS | Sugar transporter signature | 98 | 117 | IPR003663 | GO:0016020|GO:0022857|GO:0055085 | |
| Trre5g05827 | 731 | PRINTS | Sugar transporter signature | 619 | 640 | IPR003663 | GO:0016020|GO:0022857|GO:0055085 | |
| Trre5g05827 | 731 | ProSitePatterns | Sugar transport proteins signature 1. | 61 | 78 | IPR005829 | GO:0016020|GO:0022857|GO:0055085 | |
| Trre5g05827 | 731 | FunFam | monosaccharide-sensing protein 2 | 2 | 247 | - | - | |
| Trre5g05827 | 731 | Gene3D | MFS general substrate transporter like domains | 491 | 729 | IPR036259 | - | |
| Trre5g05827 | 731 | FunFam | Monosaccharide-sensing protein 2 | 471 | 720 | - | - | |
| Trre5g05827 | 731 | Gene3D | MFS general substrate transporter like domains | 2 | 260 | IPR036259 | - | |
| Trre5g05827 | 731 | MobiDBLite | consensus disorder prediction | 334 | 348 | - | - | |
| Trre5g05827 | 731 | Pfam | Sugar (and other) transporter | 497 | 718 | IPR005828 | GO:0016020|GO:0022857|GO:0055085 | |
| Trre5g05827 | 731 | Pfam | Sugar (and other) transporter | 7 | 219 | IPR005828 | GO:0016020|GO:0022857|GO:0055085 | |
| Trre5g05827 | 731 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 7 | 707 | IPR020846 | GO:0022857 | |
| Trre5g05827 | 731 | SUPERFAMILY | MFS general substrate transporter | 5 | 712 | IPR036259 | - | |
| Trre5g05827 | 731 | ProSitePatterns | Sugar transport proteins signature 2. | 103 | 128 | IPR005829 | GO:0016020|GO:0022857|GO:0055085 | |
| Trre5g05827 | 731 | PANTHER | PROTON MYO-INOSITOL COTRANSPORTER | 5 | 726 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre5g05827 | Trre-Chr5 | 57966676 | 57971717 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trre5g05827 | 1 | 731 | Organic Solute Cotransporters | AT4G35300 | 69.437 | 0.0 | 961 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre5g05827 | - | - | gmx:100791976 | 1218.37 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Trre5g05827 | 5 | 57966676 | 57971717 | Trre5g05827 | 5 | 57966676 | 57971717 | ECH |