Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05819 ATGACTTCCCTTTGCAGTGCCAATTCAGTAACTTGTCTGTCAAACAAATGGAACGGAGGTTGTTCTAACCCCACCTTCATACGACGGCCATTCACGGTGGTCGCACTTTCTCAATCCAGAAGGTCCACCGCCATTTTTATTTCATCATTGCCTTTCACCTTTCTTTTCCTCTCTCCGCCACCGCCTGCTGAGTCCCGAGAAAGACGCAAAAAGAACAACATTCCTATTGATGATTATCTCACTTCCCCTGATGGATTAAAATACTATGATTTTCTTGAGGGAAAAGGTCAAATAGCTGAAAAAGGATCAACTGTTCAGGTGCACTTTGATTGTTTATATCGGGGAATTACAGCTGTTTCAAGTCGAGAATCTAAAATCCTAGCTGGAAATCGTGTCATCGCTCAGCCATATGTATTCAAGGTGGGAGCTCAACCAGGAAAGGAAAGGAAGCGTGAATTTGTAGACAACCCTAATGGTCTATTCTCTGCACAAGCTGCACCAAAACCTCCTGCAGCTATGTACACGATAGTTGAAGGAATGCGAGTTGGCGGAAAGAGAACTGTGATTGTTCCTCCTGAAAAAGGGTATGGACCAAACGGAAAGAATGAGATTCCGCCTGGAGCTACATTTGAATTAAATATTGAACTTTTGCAAGTGGCATCTACCTGA 669 0.435 MTSLCSANSVTCLSNKWNGGCSNPTFIRRPFTVVALSQSRRSTAIFISSLPFTFLFLSPPPPAESRERRKKNNIPIDDYLTSPDGLKYYDFLEGKGQIAEKGSTVQVHFDCLYRGITAVSSRESKILAGNRVIAQPYVFKVGAQPGKERKREFVDNPNGLFSAQAAPKPPAAMYTIVEGMRVGGKRTVIVPPEKGYGPNGKNEIPPGATFELNIELLQVAST 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05819 222 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 102 220 IPR001179 GO:0003755
Trre5g05819 222 SUPERFAMILY FKBP-like 66 219 - -
Trre5g05819 222 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 98 217 IPR001179 GO:0003755
Trre5g05819 222 Gene3D - 62 222 IPR046357 GO:0003755
Trre5g05819 222 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC 32 221 IPR044180 -
Trre5g05819 222 FunFam Peptidylprolyl isomerase 62 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05819 Trre-Chr5 57917494 57919091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05819 K01802 - jre:109022249 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05819 5 57917494 57919091 Trre5g05819 5 57917494 57919091 ECH