Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05816 ATGGGTAGACGTCATGGTTGGGAACTTCCTTTTCATACTTTTCAGGTGGTGGCTATAACGGTTTTTTTCTTGTTATGCATTGCATATTATGCTTTCTTTGCTCCTTTTCTCGGAAAGGATATTTTCGAATATATCGCTTTTGGTGTTTACTCTCTACTGGCACTTTCCGTTTTCATTCTCTATGTTCGATGCACTGCCATTGACCCTGCTGATGTTGGAGTAGTGCCTGATTGTGATAAAACATCCAAGAATAGATCAAAACTTGATGAAGAGTTGGCAGAACCGAGCAAGATAGGGCTAAAGGATGAAGGAATGTCTGATCGGCATGATTCAAATGGGTGCTCCAAATTCGGATGTTGCTTGTGTAGTTTACTTGCTATAGAAGATTGCCGTAGCGATGAAGATCTACAGCAGCAATATGGAGAGGAGGATGCTTTGTTCTGTACTTTATGCAATGCTGAGGTTCGGAAGTTCAGTAAGCATTGTAGAAGTTGTGACAAATGTGTTGATGGATTTGATCACCACTGTCGGTGGTTGAACAATTGCGTTGGAAGGAAGAATTACATCTCATTTGTGTGCCTAATGGCAGTGAGCTTGGTTTGGCTTCTAGTTGAATGCGGAGTTGGGATTGCTGTGCTTGTCAGATGCTTTGTTCATAAGAAGGATACAGAGTATCTGATAGCTGAAAAGCTTGGAGCTGGATTCACTCGAGCTCCATTTGCTACAATAGTGGCCATATGCACAGCAGTTTCTTTCCTTGCAATTATACCTCTGGGAGAGCTATTCTTTTTTCATATGATCTTGATCCGAAAGGGTATTACAACGTATGAGTATGTCGTTGCAATGAGAACTCTGACTGAACCACCTGGTCCTTCCGTTGACGCGGGTGAGCAGCAGAGTCCACCTTCATCTCCTACTGGGTCATCTGTCACTGCAATAAGCGGAAGAAGCTCTGTCGGAATGAGTTTGCAAATCAAAGGTGCCTGGTGTACACCTCCAAGAATCTTTATGGATCAACAGGATGAAATTATACATCATTTGGAGCCAGGCCGTTTACCATCTACAGTGGATCCAGATGCAATACAACCACCTGACAAAGGGAAAAAATTGAACCAGCGCCCTGTGCGAATAAGTGCATGGAAGCTTGCAAAATTAGATTCCAATGAGGCAGCTAAGGCATTAGCTAAAGCTCGAGCCTCATCATCCGTGCTTCGTCCAATTAGTTCTCGATCTCATGCATATGATGTAGATCATTTATCAAGTAGCAATGTGAGTGGAAGAAGCAGCCCTGTTAGCAACCAGGGATTTCATAACAAATATGATGCAGCAGGAACATCAAGATTATCTCCTTCCAAGAGCTCATACCCTCCCAGTCAAGCAAGCAGGGAAGATTTAGATGCATGTCAGCACAGTATGAGCAACTTTAGCAGTCCACAAGTCTCCAACCTAACTCCATCGCCAATGCAGAGACCAGGTTTGAACAGAGATCATTTCAACCCCATGTATCAGCAACCATCTACAAATCAGTCTCCTTCATCAGCTAAAGGAAGCGAAGAGGGAAATATAAATCCAGTTAATGGAAATGGTGCACGTGTGCCAATGAGAAATAACAGCTTAGCTGTTTCAGAGGATAGAAGATCGTCCGTGTTTTGGGATCCAGAAGCTGCACGGTTTGTCCCAAACTCATCTAGAGCTCAAGGCAGTTCTCAGATTCCTGGAACAGAGTTGATGTACACTGGTCGTTCTATATTTTTTGGCAGTCCCGTTGTGAATGAACAGTCAAATGCAAGAACAGGAAACAGCAGCTCAGTAGCTGGTGTTTCGGGCAGAGATAATACAACAAGAGATTTTCAAACAGGTAGATCACGTAGAGGTGCCCAGCTTCCAGTGTTTGTTCCTGGTTATTCCCAGCAAAACAAGTTCTCTTAG 1929 0.4344 MGRRHGWELPFHTFQVVAITVFFLLCIAYYAFFAPFLGKDIFEYIAFGVYSLLALSVFILYVRCTAIDPADVGVVPDCDKTSKNRSKLDEELAEPSKIGLKDEGMSDRHDSNGCSKFGCCLCSLLAIEDCRSDEDLQQQYGEEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVSLVWLLVECGVGIAVLVRCFVHKKDTEYLIAEKLGAGFTRAPFATIVAICTAVSFLAIIPLGELFFFHMILIRKGITTYEYVVAMRTLTEPPGPSVDAGEQQSPPSSPTGSSVTAISGRSSVGMSLQIKGAWCTPPRIFMDQQDEIIHHLEPGRLPSTVDPDAIQPPDKGKKLNQRPVRISAWKLAKLDSNEAAKALAKARASSSVLRPISSRSHAYDVDHLSSSNVSGRSSPVSNQGFHNKYDAAGTSRLSPSKSSYPPSQASREDLDACQHSMSNFSSPQVSNLTPSPMQRPGLNRDHFNPMYQQPSTNQSPSSAKGSEEGNINPVNGNGARVPMRNNSLAVSEDRRSSVFWDPEAARFVPNSSRAQGSSQIPGTELMYTGRSIFFGSPVVNEQSNARTGNSSSVAGVSGRDNTTRDFQTGRSRRGAQLPVFVPGYSQQNKFS 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05816 642 MobiDBLite consensus disorder prediction 296 312 - -
Trre5g05816 642 MobiDBLite consensus disorder prediction 418 489 - -
Trre5g05816 642 MobiDBLite consensus disorder prediction 289 312 - -
Trre5g05816 642 MobiDBLite consensus disorder prediction 499 533 - -
Trre5g05816 642 ProSiteProfiles DHHC domain profile. 146 196 - -
Trre5g05816 642 MobiDBLite consensus disorder prediction 592 642 - -
Trre5g05816 642 MobiDBLite consensus disorder prediction 592 621 - -
Trre5g05816 642 Pfam DHHC palmitoyltransferase 144 280 IPR001594 GO:0016409
Trre5g05816 642 MobiDBLite consensus disorder prediction 349 371 - -
Trre5g05816 642 MobiDBLite consensus disorder prediction 418 533 - -
Trre5g05816 642 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 22 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05816 Trre-Chr5 57904189 57909325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05816 147 190 Lipid Metabolism Gene Families AT4G22750 45.455 4.70e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05816 K20027 - gmx:100818808 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05816 5 57904189 57909325 Trre5g05816 5 57904189 57909325 ECH