Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05807 ATGGAGAAGAAGATCTCAGGGTCAATTTGGTCAATGTTGCATCTCTGTCTCTTTCTTCTACTCATCGGAATGTTAGCGCCACCTTCTCATGCCGTTGACGACAAATGTGCTGCTTGTAAAGCTGTTGCGGGAGAGCTGGAGATTGGACTTTCCACTGAGAAGCCGCGAAATCATTTGGATATGCGCCATCGCTTGGACTCCAAGGGCCAGCGTCAAGGAAAGTTAATCGATTACAGAATCAGTGAATTAAGAGTCGTTGATCTTCTTGATGGCCTTTGTGATAAGATGCTAGACTACACACTCAGGATATTTCCAGATTCACATGAATGGTATAAAGTGGGTAACTGGGATAACCTCATAACAAATAAACAAGAAGCTCGGGCATATTCGAAAGATATCTCTTCTTATTGTGGACGATTACTTGAAGAAACAGAAGATGAGCTAACTGAATTGATAAAGAAAGGATCTGTTAAAGTGGGAGATGTGAGCAAAGTTCTTTGTCAAGACTTGAGCAAACATTGCAGTCAGACGAGTGTATCACATGAAACGGAGGTCGATGATGATGAAGATGACAGAGAGCTCTAA 585 0.4222 MEKKISGSIWSMLHLCLFLLLIGMLAPPSHAVDDKCAACKAVAGELEIGLSTEKPRNHLDMRHRLDSKGQRQGKLIDYRISELRVVDLLDGLCDKMLDYTLRIFPDSHEWYKVGNWDNLITNKQEARAYSKDISSYCGRLLEETEDELTELIKKGSVKVGDVSKVLCQDLSKHCSQTSVSHETEVDDDEDDREL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05807 194 PANTHER MIR-INTERACTING SAPOSIN-LIKE PROTEIN 23 189 IPR042415 -
Trre5g05807 194 Pfam TLR4 regulator and MIR-interacting MSAP 35 174 IPR021852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05807 Trre-Chr5 57858806 57862571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05807 K22936 - gmx:100781382 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05807 5 57858806 57862571 Trre5g05807 5 57858806 57862571 ECH