Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05764 ATGGGAAAGAGTCCCAGAAAATTAATGAATCCAATTAGTAAATGTACTGGACCTTCGATATTGGATATGATACTGAAAGAGTATCCGAATTCGGATCTTTTTTTGCATAGTCCTTTAGACTCGGATTCATTCAAGTTCTCGTTGTTGAAGTTTGCACCAAATGTTGCTGCCGTTAAAATATTTCACCCTCAACCGTTGCCAGAGAATGAGTCTTTTGTTCGTGTTCTCACCGCGCACAACTCGCCTAACGGAATTCAGGACTTATTCAATATTTTAACCTGGTGGAAGGATGTCTAA 297 0.3939 MGKSPRKLMNPISKCTGPSILDMILKEYPNSDLFLHSPLDSDSFKFSLLKFAPNVAAVKIFHPQPLPENESFVRVLTAHNSPNGIQDLFNILTWWKDV 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05764 98 PANTHER OS08G0360500 PROTEIN 16 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05764 Trre-Chr5 57498476 57499839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05764 16 92 EF-hand Containing Proteins AT1G76250 60.000 2.70e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05764 - - gmx:100786713 139.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05764 5 57498476 57499839 Trre5g05764 5 57498476 57499839 ECH