Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05759 ATGGGTTGCAACGCCTCTAAACTTGACCGTCTTCCGGCGGTGTCATTGTGCCGTGACCGTTGCAAATTCATCGACGAATCACTCCGTCAAAGCTACACCCTCGCTGATTCACACGTCGCTCACATGGATTCCTTAAGAACACTTGGTCCTGCTCTTCTTTGTTTCTTCCAACAATTTGAAGATTCTGGCGAAATCAAACCCTCATTTTCGAAATCACCACCTCCACCACGGACTCAATCTTCTTCTAGTTTTGATTCAGATGCACAAGTCCTACATTCTGATTCAGAACCAGAGGATTCAGAAAAAGAATCTCAATTATTCACTCATAGTTATAAACATTGCGATTATATCCACCACGACACCGTAATATCGAGTGTTCCTGATAATGTGACTTTCATGACTTACATGAAACCTGTTTACGATTCATATTATCCAACACCTCCGTCAAATGCAGCCGGAGTTTTTTCCGGTTTAAAGCCGCCGTCTCCGCCTCCTCCGAGTAGTTCTGCTTGGGATTTCTTGAACTTTTTCGAACCGTATGAGAAATATCAAGTACCGTACTGTGACGGTGGGGACGGTTACGCTGACACAAATGTAACGGTTGAGAATGAAAATGGAAAGGTTAACGGTCACGTGATTGGTGAAAATGGACCGTTTAAATCTAACGGAGAAGGAGTTAACGTTAGTAAGGTAGAAAATGGAGAAGTGAAAGACAATGAAGCTGATTTGAAAAAAGAGAGTTCAGTTTTGGAGAAAAAGTTACCGGAGATAAAAGAATCTGTAAAAGGTTTTTCTGAAGCGGTGAAAGAGATTCAGATTCTACTTGAGAGAGCATCGGATTCTGGGAATGTGCTTTTGGAAATGCTAGACGTTGGGAAACTCCGTTACCATTCAAAAATTGAACTCAATCCAGTTTCGTGCAAGATTATGCATGTATTTACTCCGTTGAATCCCTTGACGGTTAATTGTGTGGAATCCCCGTTGCTTGGACGGCAAACGGGATCAAAGTGTGAAGGAGTTTACATGGAGAAGGGGCTGAGTTCTGCGAATCTATGCTCCACTTTAAGGAAGTTATGTATGTGGGAGAAGAAGCTATATCATGAAGTTAAGGCTGAGGAAAAGTTGCGCATGCTTCACCATAAGAAATGTAAACAGTTGAAACATATGAATAAAAAGGATGCCGATGTACAGAAAATTGATTCTGTTAAAGCTTACATCGGCATATTAGTTACAAAAATGAAAATGTCTATCCAAGTGGTTGACAAGATATCTATTACTATTAGTAAGTTGACGGAAGAGGAGCTATGGCCACAGATTAACAGGTTTATTTTCATGTTTCTCGGAATGTGGAAAGATATGCAAGAATGTTACAAACGCCAGTACGAAGAAATTGTTAATAATGAAACCAAAGTTTTAAGTGTCTCTTCATTAAACAGAAAGCCTTGCAATGCTAATATTGATGCAGCATTAAAACTCAAATCTGAGTTACAGAAATGGAGTTTAAGCTTCTTAGATTGGATTCAAGCCCAAAAATCCCAAGTGAAAAGCCTGAATGATTGGCTAGTAAGATGTCTAATGTATGAACCTGAAGAAATATCATATGATTCAACTCCCCTTGGTGCACCACCAGTGTTTGTGATCTGTAACAAGTGGTCAAGGGCAGTGGATAATATCTCAGAGATGAATGTAATTGAAGCTGTAAATGGATTTACACTCAGAGTAAATGAACTATTGGAAAAACATATTTTAGAGCTTCAGAAGAATTCAACATTGGACAAGGAGTTAGAGAAAAAAGTTAAAAATTTGGAGAGGCAGGAGCAGAAGATGTACAAAATGGTGAAGACTCGAGAGAGAAAGATGAATCCAATTGCAAAAGAATTGAGAGAAGGAGATGCTGTTCATAATAATGATGTTAAAGTTGATTCTATTAGCCTACAATCAGATTTGAAACAGATCTTTGTTGCCATGGAGAAGTTCAGTGCCACTACTGCTAGCTTATATGAAGAACTTTGCCAACAAATTAAGCAAGATGGTCATGTTTTAGGAGAATCCAACAAAAATAACTAG 2067 0.3899 MGCNASKLDRLPAVSLCRDRCKFIDESLRQSYTLADSHVAHMDSLRTLGPALLCFFQQFEDSGEIKPSFSKSPPPPRTQSSSSFDSDAQVLHSDSEPEDSEKESQLFTHSYKHCDYIHHDTVISSVPDNVTFMTYMKPVYDSYYPTPPSNAAGVFSGLKPPSPPPPSSSAWDFLNFFEPYEKYQVPYCDGGDGYADTNVTVENENGKVNGHVIGENGPFKSNGEGVNVSKVENGEVKDNEADLKKESSVLEKKLPEIKESVKGFSEAVKEIQILLERASDSGNVLLEMLDVGKLRYHSKIELNPVSCKIMHVFTPLNPLTVNCVESPLLGRQTGSKCEGVYMEKGLSSANLCSTLRKLCMWEKKLYHEVKAEEKLRMLHHKKCKQLKHMNKKDADVQKIDSVKAYIGILVTKMKMSIQVVDKISITISKLTEEELWPQINRFIFMFLGMWKDMQECYKRQYEEIVNNETKVLSVSSLNRKPCNANIDAALKLKSELQKWSLSFLDWIQAQKSQVKSLNDWLVRCLMYEPEEISYDSTPLGAPPVFVICNKWSRAVDNISEMNVIEAVNGFTLRVNELLEKHILELQKNSTLDKELEKKVKNLERQEQKMYKMVKTRERKMNPIAKELREGDAVHNNDVKVDSISLQSDLKQIFVAMEKFSATTASLYEELCQQIKQDGHVLGESNKNN 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05759 688 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Trre5g05759 688 MobiDBLite consensus disorder prediction 65 104 - -
Trre5g05759 688 MobiDBLite consensus disorder prediction 75 90 - -
Trre5g05759 688 Coils Coil 585 612 - -
Trre5g05759 688 Pfam Protein of unknown function (DUF632) 265 575 IPR006867 -
Trre5g05759 688 PANTHER UNCHARACTERIZED 1 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05759 Trre-Chr5 57461950 57465052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05759 1 674 Acyl Lipid Metabolism Gene Families AT2G27090 21.429 9.56e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05759 - - cam:101491047 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05759 5 57461950 57465052 Trre5g05759 5 57461950 57465052 ECH