Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05727 ATGGAGAAATTGAATTTGTATGGTTTGAGCCATCTCTTCATTACCGTTTTTCTTCATAACTTATCGACATTCATGGTGGTACCGGCCATCACCGATGTCACGATGGCAGCGCTTTGTCCCGGACAAGATGAATGCTCACTTGCCATCTACCTTACTGGTTTTCAACAAGCGATGATAGGATTGGGAACGCTTGTGACAATGCCCCTTTTGGGTAGTCTCTCCGATAAGTATGGAAGGAAGGCTATTCTCACACTTCCTATGACCCTCATGATTATTCCCTTGGGAATATTAGCATACAGTAGGACAAAAACATTCTTCTATGTGTATTACGTGTTTAAGATCATCATTTTCATGATCTGTGATGGATGCATTCCTTGCCTTGCTCTAGCTTATGTTGCAGATAATGTTCCAGAAGGTGGGAGAAGCACTGCCTTTGGAATTCTTTCAGGGATTGGATCCTCTGCTTTTGTGTGTGGTACTCTAGCAGCTCGTTTTCTATCTACTGCTCAAACTTTTCAGGTTTCCACTTTTGCTGCGGTGCTCGGAGCAGTTTACATGCAAATTTTCCTTCGAGATTCAGTCATGGATCAAAACAACGTCCTTTGTATCCCAATCATTTCAAATGAAAAGCCGACAATTTCGAAAATAAATGGTAAATCGAAATCCAACATGTCGATATTGAAAGCATTGCGTTCTTTGCAGGATCTAACATCTTTCCTCAATAGTAGCAAGACTATTACTCAAGCAGCAATTGTTGCATTCTTCAGCAATCTTGCAGATGTTGGCTTTCATGGTTCAATGATGTATTACTTAAAGGCTCAGTTTCATTTTGATAAGAATCATTTTGCTGATTTAATGATCATTTCTGGTATTGCAGGAACTGTATCACAGCTTTTTCTTATGCCAATATTTGCTCCTACTTTGGGCGAGGCAAGACTTCTTTCGATCGGGCTATTTTTTCACTTTGTACATATGTTCATGTACAGCATAGCATGGTCCTCCTGGGTTCCTTATGCTGCTGCAATGTTCTCAATTTTGTTTGTTTTTTCACAACCATGTATACGAAGTATTGTGTCTAAACAAGTTGATCCCCACGAGCAGGGAAGAGCTCAAGGTTGCATCTCAGGCATATGTTCAATTGCTCATATTGTATCTCCCTTGGTTTTCTCTCCATTAACGGCTCTATTTTTATCTGAAAGGGCACCTTTTAATTTTCCTGGCTTCAGTATATTGTGTATTGGAATTGCTTCGATGGTATCTTTTCTTCAGAGCATGATGCTAAGAGTAGTTCCTCCCATTTTGAGTTAG 1308 0.4006 MEKLNLYGLSHLFITVFLHNLSTFMVVPAITDVTMAALCPGQDECSLAIYLTGFQQAMIGLGTLVTMPLLGSLSDKYGRKAILTLPMTLMIIPLGILAYSRTKTFFYVYYVFKIIIFMICDGCIPCLALAYVADNVPEGGRSTAFGILSGIGSSAFVCGTLAARFLSTAQTFQVSTFAAVLGAVYMQIFLRDSVMDQNNVLCIPIISNEKPTISKINGKSKSNMSILKALRSLQDLTSFLNSSKTITQAAIVAFFSNLADVGFHGSMMYYLKAQFHFDKNHFADLMIISGIAGTVSQLFLMPIFAPTLGEARLLSIGLFFHFVHMFMYSIAWSSWVPYAAAMFSILFVFSQPCIRSIVSKQVDPHEQGRAQGCISGICSIAHIVSPLVFSPLTALFLSERAPFNFPGFSILCIGIASMVSFLQSMMLRVVPPILS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05727 435 Pfam Major Facilitator Superfamily 12 386 IPR011701 GO:0022857|GO:0055085
Trre5g05727 435 ProSiteProfiles Major facilitator superfamily (MFS) profile. 8 435 IPR020846 GO:0022857
Trre5g05727 435 CDD MFS_SLC46_TetA_like 12 426 - -
Trre5g05727 435 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 9 417 - -
Trre5g05727 435 Gene3D MFS general substrate transporter like domains 9 432 IPR036259 -
Trre5g05727 435 SUPERFAMILY MFS general substrate transporter 12 419 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05727 Trre-Chr5 57239151 57243911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05727 8 431 Organic Solute Cotransporters AT2G16990 44.820 1.78e-119 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05727 - - mtr:11436685 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05727 5 57239151 57243911 Trre5g05727 5 57239151 57243911 ECH