Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05722 ATGGCAAAAGCAAAGTATTCACGTTCACCGGGGAAGAAATTATCGACGGTTACGTTGATTTTCTGGACTCTTTTCATGCTTACACTTGTTATAATTGTGCTCCTTGCACTCGGAATTGTTTATCTTCCAAACACAAGCGATGATTCTTCAATCACAACAGATCTTAGTGGTTTCAGACGCAAAACCTCTGAAAGTTTGGCGGAAAGGAAAGAGCAGTGGACTGAAATTCTTTCATGGGAGCCAAGAGCTATCGTCTATCACAATTTTCTGTCAAAAGAAGAATGTGAGTACATGATCAATCTTGCCAAGCCTTTCATGGCAAAATCAAGTGTTGTAGATAGCAAGACTGGAAAGAGTACAGAAAGCAGGGTTCGAACTAGTTCAGGAATGTTTCTGAAGAGAGGAAAGGACAAAACTATCCAGAATATTGAAAGAAGAATTGCCGACTTTACCTTCATACCAGTAGAGAATGGAGAGGGACTTCAGGTTCTTCACTATGGAGTTGGGGAGAAATATGAGCCTCATTACGATTACTTCCTTGATGCGTTCAACACTAAGAATGGAGGCCAACGAGTTGCTACAGTTCTTATGTATCTGTCTGATGTCGAAGAAGGTGGCGAGACCGTATTTCCTGCTGCAAAGGCCAACTTTAGTTCTGTGCCATGGTGGAATGATTTATCTGAATGTGCTAGGAAGGGTCTATCAGTGAAACCAAAAATGGGTGATGCTCTGCTGTTTTGGAGCATGAGACCAGATGCCACACTAGATGCATCTAGTTTACATGGCGGTTGCCCAGTAATTAGAGGAAATAAATGGTCTTCAACTAAGTGGCTGCATCTTGAGGAATACAAAGTTTAA 858 0.4161 MAKAKYSRSPGKKLSTVTLIFWTLFMLTLVIIVLLALGIVYLPNTSDDSSITTDLSGFRRKTSESLAERKEQWTEILSWEPRAIVYHNFLSKEECEYMINLAKPFMAKSSVVDSKTGKSTESRVRTSSGMFLKRGKDKTIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDAFNTKNGGQRVATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDLSECARKGLSVKPKMGDALLFWSMRPDATLDASSLHGGCPVIRGNKWSSTKWLHLEEYKV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05722 285 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 58 280 IPR045054 -
Trre5g05722 285 SMART p4hc 81 279 IPR006620 GO:0005506|GO:0016705|GO:0031418
Trre5g05722 285 FunFam Prolyl 4-hydroxylase 4 73 280 - -
Trre5g05722 285 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 157 280 IPR005123 -
Trre5g05722 285 Gene3D q2cbj1_9rhob like domain 74 280 - -
Trre5g05722 285 Pfam 2OG-Fe(II) oxygenase superfamily 161 279 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05722 Trre-Chr5 57196186 57198908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05722 K00472 - gmx:100818586 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05722 5 57196186 57198908 Trre5g05722 5 57196186 57198908 ECH