Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05718 ATGGAGATGAAGAAGGATATTGGAGCTATTAATGGTAACTTTGTGGAAGAAGAAGAAGAAGAAGCTGTCTCAAGCTTTAAATTTTCACATCTTCTTGCTTCTAAGGATCGTGATTTTCTTCTATCACCATCTGGAGCTCAGGTGAAAATTTCAGAACTTGAAGGCAAAGTAGTGGGTCTATTATTTGCTGCCAATTGGTACCCACCATGTCGTGGATTCACTCAATTGCTCATTGGTATCTACCAAGAACTCAAAAACAATATCCCACAATTTGAAATAGTGTATGTCTCTTCTGATGAAGACTTAGATGCATTTAATGGATTTTACCAAAACATGCCATGGTTAGCAATTCCTTTCTCTGATTTAGAAACAAAGAAAGCATTGAACAGAAAATATGATGTTGAAGGTATTCCATGTTTGGTTATGTTACAACCTGATGATAGTAAAGGCGAAGCAACACTTCGCGATGGTGTTGAACTTATTTATCGATATGGCGTTCAAGCTTATCCGTTCAGTAAAGAAAGGTTGGAACAATTGCATCAGGCTGAAAGAGAGAAGCTTGAAAATCAAACACTTGCTAATTTACTTGCAAATAATCATAGAGATTATGTTTTGAGTCAGACAAGTGGATTACTTACACAGGTACCTGTTGCATCTTTAGTGGGAAAAACAATTGGACTATACTTTTCAGCTGGATGGTGTGTCCCATGCACCAAATTCACTCCCAAATTAATTTCAGTATATCAGAAAATCAAGCAAGAGTTAGCTGAAAAACAAGATCATGAAGAAGGTTTTGAAATTGTTCTTGTTTCCCATGACCGCGACCAAGAATCGTTCGACTCTTACTACAACACCATGCCGTGGTTAGCATTACCATTTGGTGACCAAGAAATAAAGAACCTTGCAAGACACTTTGATGTACAAGGAATACCTTGTTTGGTTATTATAGGTCCTGATGGTAAAACAATAACAATACATGGAAGAAACTTGATTAATTTGTACCAAGAAAATGCTTATCCTTTTACTACTACTAAAGTGGAGCAGCTAGAGAAACAACTTGAAGAAGAGGCTAAGGATCTTCCAAATTTGGTGCAACATGAAGGGCACCATCATGGATTGAATTTAGTGTCTGATGGAAATGGTGGAGGACCCTTTATTTGTTGTGTTTGTGATGAACAAGGGTCTAATTGGGCTTATCAATGTCTTCAATGTGGCTATGAGGTACACCCAAAGTGTGTCACAACTGTGCATGGATAG 1257 0.3755 MEMKKDIGAINGNFVEEEEEEAVSSFKFSHLLASKDRDFLLSPSGAQVKISELEGKVVGLLFAANWYPPCRGFTQLLIGIYQELKNNIPQFEIVYVSSDEDLDAFNGFYQNMPWLAIPFSDLETKKALNRKYDVEGIPCLVMLQPDDSKGEATLRDGVELIYRYGVQAYPFSKERLEQLHQAEREKLENQTLANLLANNHRDYVLSQTSGLLTQVPVASLVGKTIGLYFSAGWCVPCTKFTPKLISVYQKIKQELAEKQDHEEGFEIVLVSHDRDQESFDSYYNTMPWLALPFGDQEIKNLARHFDVQGIPCLVIIGPDGKTITIHGRNLINLYQENAYPFTTTKVEQLEKQLEEEAKDLPNLVQHEGHHHGLNLVSDGNGGGPFICCVCDEQGSNWAYQCLQCGYEVHPKCVTTVHG 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05718 418 Gene3D Glutaredoxin 31 172 - -
Trre5g05718 418 Gene3D Glutaredoxin 199 343 - -
Trre5g05718 418 SUPERFAMILY Thioredoxin-like 212 325 IPR036249 -
Trre5g05718 418 Coils Coil 346 366 - -
Trre5g05718 418 PANTHER THIOREDOXIN 17 397 - -
Trre5g05718 418 CDD C1 387 417 - -
Trre5g05718 418 Pfam Thioredoxin-like 55 146 IPR012336 -
Trre5g05718 418 Pfam Thioredoxin-like 222 321 IPR012336 -
Trre5g05718 418 Pfam C1 domain 368 413 IPR004146 -
Trre5g05718 418 ProSiteProfiles Thioredoxin domain profile. 181 358 IPR013766 -
Trre5g05718 418 SUPERFAMILY Cysteine-rich domain 357 414 IPR046349 -
Trre5g05718 418 CDD TryX_like_TryX_NRX 38 171 IPR045870 GO:0004791
Trre5g05718 418 SUPERFAMILY Thioredoxin-like 41 147 IPR036249 -
Trre5g05718 418 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 368 418 IPR002219 -
Trre5g05718 418 Coils Coil 173 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05718 Trre-Chr5 57172227 57177897 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05718 K17609 - gmx:100815038 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05718 5 57172227 57177897 Trre5g05718 5 57172227 57177897 ECH