Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05712 ATGTCGACGAGCATAGAAAATGGGCAGATAGTCGAAGAATCAAACTATTCAGAAACAGAACCACGGGAAGAGAAAATCAACGAAGAAGAAGAAGATGATTTAAACAAGCTTCTACTCCCTGATCCGCAGAATCTTCCTCTCATTCCTCCTTCTGCCGTTGAAACCAATTTTGTCACTTACTTCGCTCTAGATTTTACTAAGCCTGCTCACGATCAATACATTTACCGGCACGCCAATGGGTTGTGTGTTATTGGCTTGGCTCCTTCACACATTGCTTTTAAGGATGAAGGTGGAATCACAGCTGTAGATTTTAATGTTGGAAAGTCTGATCGCAGCGGGGTCAAAGTTACCGGAAAGCGGAAGAAGAATGCACAACACTTTGAGTCCAATACGGCGTTATGTAAAGTTTCTACCAAAAATGATTCTTATATCGTGAGGTGTTGTGTCAAAGGTTCCCTTTTGGAAGTGAATCCACAACTAATCAATCATCCAGAACTGCTTAATGTTTCGGCTGATAGAGAAGGATACATTGCTATTATGATGCCAAAACCAGCTGATTGGCTCAAGGTCAAGGCTTCCCTTGTTAGCCTTCAGGAGTACAAGAAATTGAGGGAAGTCAGTTGTGATATAAAGAATGCGGTGCCTTGTGACAACACCTTAAAAGAGACACCGTAA 675 0.4193 MSTSIENGQIVEESNYSETEPREEKINEEEEDDLNKLLLPDPQNLPLIPPSAVETNFVTYFALDFTKPAHDQYIYRHANGLCVIGLAPSHIAFKDEGGITAVDFNVGKSDRSGVKVTGKRKKNAQHFESNTALCKVSTKNDSYIVRCCVKGSLLEVNPQLINHPELLNVSADREGYIAIMMPKPADWLKVKASLVSLQEYKKLREVSCDIKNAVPCDNTLKETP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05712 224 Gene3D - 62 205 - -
Trre5g05712 224 MobiDBLite consensus disorder prediction 1 15 - -
Trre5g05712 224 PANTHER UNCHARACTERIZED 23 207 IPR039169 -
Trre5g05712 224 SUPERFAMILY Single hybrid motif 66 204 IPR011053 -
Trre5g05712 224 MobiDBLite consensus disorder prediction 1 32 - -
Trre5g05712 224 MobiDBLite consensus disorder prediction 16 32 - -
Trre5g05712 224 Pfam Glycine cleavage H-protein 110 203 IPR033753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05712 Trre-Chr5 57154562 57156948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05712 - - gmx:100775677 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05712 5 57154562 57156948 Trre5g05712 5 57154562 57156948 ECH