Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05665 ATGGAAATTGAACAGCAGCAAGTGCAACTACCTATGATGATCAAGTCTAGATTTAAACGCATCTGTGTTTATTGTGGTAGCACCCCCGGAAAAAACCCAAGCTACCAAATTGCTGCTATTCAACTTGGAAAACAATTGGTGGAAAGGAAGATTGACTTGGTATATGGTGGAGGAAGCATAGGGTTGATGGGTCGTATCTCACAAGTTGTCTATGATGGTGGACGCCACGTCTTAGGAGTGATTCCAAAGACACTTATGCCTAGAGAGATAACTGGAGAGACAGTGGGAGAAGTAAGAGCTGTATCGGACATGCATCAACGTAAGGCCGAAATGGCTCGACAAGCTGATGCTTTTATTGCCTTACCAGGTGGTTATGGCACCCTGGAAGAACTACTTGAAATTATTACCTGGGCTCAACTTGGTATCCATGATAAACCGGTGGGGCTGTTGAACGTGGATGGTTACTACAATTCACTGCTGGCATTCATGGACAAAGCTGTAGACGAAGGTTTTGTAACACCAGCTGCCCGTCACATTATTGTATCTGCCCATACTGCCCAAGATCTCATGTGCAAACTTGAGGAATATGTCCCTATGCACTGTGGTGTGGCCCCAAAGCTAAGTTGGGAGATGGAACAACAACAGTTAGTTAATACAGCAAAGTCAGATATTTCTCGTTGA 681 0.4449 MEIEQQQVQLPMMIKSRFKRICVYCGSTPGKNPSYQIAAIQLGKQLVERKIDLVYGGGSIGLMGRISQVVYDGGRHVLGVIPKTLMPREITGETVGEVRAVSDMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAHTAQDLMCKLEEYVPMHCGVAPKLSWEMEQQQLVNTAKSDISR 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05665 226 FunFam CASP-like protein 9 195 - -
Trre5g05665 226 PANTHER LOG FAMILY PROTEIN YJL055W 14 216 - -
Trre5g05665 226 Gene3D - 9 195 - -
Trre5g05665 226 NCBIfam Rossman fold protein, TIGR00730 family 19 196 IPR005269 GO:0009691|GO:0016787
Trre5g05665 226 SUPERFAMILY MCP/YpsA-like 17 196 - -
Trre5g05665 226 Pfam Possible lysine decarboxylase 63 192 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05665 Trre-Chr5 56743955 56746542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05665 K22522 - gmx:100782787 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05665 5 56743955 56746542 Trre5g05665 5 56743955 56746542 ECH