Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05659 ATGGGTTCTGTTTCTTTAAAAATTGGTGATGGAACAGCAAGATTCAAAAGATCAACACTTTGTTCTTCAGCAGTTAACATTCTCATGATCTTATCTGTTATCACGACAAATCTTTTTGCTCTTTATGCTTTCACTTCTTCCCCTAAAAACAACCAAACAGAACAACTTCACCAAGTACACAAAAACTTCTCTCTCATCTCACAACAAGTTTCATTAATTCTCAGAGAAATTGATCAATCTCAAAAGAAACTAGCCCAGATAGAAAAACAGCTTCTTGGTTATGAAAGTTTTGATCTTTCAAGACCCAACATTGCAAAAGAGCTTAAACTTTTTCTTAACCCTCATAAACTTCCTTTGGGTAAAGATTCCAAAACTGGAATCACTGAAATGGTTTCATCTGTGGGTCATTTATGTGAGAAATCTTCTGATTTGTTGTCTCAGTATATGAATTACAAAGTGTTTGGAAATTGCCATGATGATTGGAGTTTTGCACAGAAATTGATTTTGAAAGGGTGTGAGCCTTTACCTAGAAGAAGGTGTTTTGCTAAAACTGTTTCTTCTAAGGTAAATTTTCTTCATCCTTTTCCAATTTCACTTTGGAAAACTGTTAGTAACAAAACTGTTAATTGGAGTGGTTTTAGTTGTAAGAGTTTTGAGTGTTTAAATGGTAAGAAATTGAATAGAGATTGTGTTCATTGCTTTGATTTGGTTAATGGATATGAGAATCAAAGATTTGTTAAGTCTAGGAGTAAGAATGATTTTCTTGTTGATGATGTTTTGGCATTAGGAAATGGTGGAATTAGAATAGGATTTGATATTGGAATTGGTTCTGGATCTTTTGCTGCTGTAATGGCTGAAAGGAATGTTACAATTGTTACTAGTACTCTTAATATTGATGCACCTTTCAATGAATATATAGCTGCAAGAGGACTTTTTCCACTTTTCATAAGCTTGAATCATAGGTTTCCTTTTTATGATAATGTGTTTGATTTGGTTCGCGCTTCGAGTACATTGGATTATGATGATGATGTTGTTGGTGGGAAACAAGAGAAGTTGGAGTTTTTGATGTTCGATATTGATCGAATTTTGCGGGCAGGTGGTTTGTTTTGGATTGATAACTTCTATTGTTCTAATGAAAAGAAAATTGCATTGACTAGGTTGATTGAAAAGTTTGGATATAGAAAATTGAAATGGGTTGTGGGAGAGAAGGTTGATAGTGGCAAGTATCATGTTTTCTTATCTGCTGTTCTTCAGAAGCCTGTTAGGGTTTAA 1272 0.3381 MGSVSLKIGDGTARFKRSTLCSSAVNILMILSVITTNLFALYAFTSSPKNNQTEQLHQVHKNFSLISQQVSLILREIDQSQKKLAQIEKQLLGYESFDLSRPNIAKELKLFLNPHKLPLGKDSKTGITEMVSSVGHLCEKSSDLLSQYMNYKVFGNCHDDWSFAQKLILKGCEPLPRRRCFAKTVSSKVNFLHPFPISLWKTVSNKTVNWSGFSCKSFECLNGKKLNRDCVHCFDLVNGYENQRFVKSRSKNDFLVDDVLALGNGGIRIGFDIGIGSGSFAAVMAERNVTIVTSTLNIDAPFNEYIAARGLFPLFISLNHRFPFYDNVFDLVRASSTLDYDDDVVGGKQEKLEFLMFDIDRILRAGGLFWIDNFYCSNEKKIALTRLIEKFGYRKLKWVVGEKVDSGKYHVFLSAVLQKPVRV 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05659 423 Coils Coil 70 90 - -
Trre5g05659 423 Gene3D Vaccinia Virus protein VP39 237 411 IPR029063 -
Trre5g05659 423 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 231 391 IPR029063 -
Trre5g05659 423 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 264 371 IPR004159 GO:0008168
Trre5g05659 423 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 24 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05659 Trre-Chr5 56666276 56667547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05659 - - gmx:100798510 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05659 5 56666276 56667547 Trre5g05659 5 56666276 56667547 ECH