Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05646 ATGGGAGCTCTTGCTACATTTTCTTCTCCTTGGACTCCCGATGACGATCTTTTACTCAGAAACGCCATTGAGAGTGATGCTTCCTTGGAGTCACTTGCGAAAGGCGCAGTTCAGTTTTCTCGAAAATTTAGTCGTGCGGAAATACATGAAAGATGGCATTTTCTACTCTATGACCCTTCAGAAGTCTCTGCTTCTATGTTAGATAACAAATCTGGACACTCAAAAGAACAGAAAATTGTTTCTGATAAGAGAAAACCTCAAAGTGTTCGAGATTCTTATTATGCTATGCGTAAAAGAATCCGCAGAGATATGCCAACATCCATGGACTGCAATTTTCTGGTTGATCCAGAAGATGGGGATTATCTGGTAAATGGAGATGAGCATTTGCCCGAAAACGGTGTACCCGAGGGTTCATCTTTTAACCACTTTACGAATCATGATTTGTCATCCGAGAACTGTATACCTGAGGATCCAACTTTGAATCACTTTTCGAATCAGGATCCATCACAGTATGTTCTTCCAGAAAATATTATGGATATTGAAGTTGCAATTAATGGAACTACTACTCAAGGGTTTTACAATGGAGTTGATGATATAATTGAAGAGAATTTCCCCACCGACCAAAACAATATTCCTCAGGAGGAACCTCAAATTCTTGAAGATAATGTTCCTCTGAATGGAGCTGCTGATGAATTGGATGTTCCAATAGAATTAGATATAGATAACTTTATCAGAGATGATGATTTAGAGGATATGTCTTTGTCTGCATTTAACCAAATCAACCATGACCCTGCAAATTTGTGCTCCGAGTTTGATGAAGATTGTATGTTTGATTCACCCGAGTTAGAGTGTGGAAATTCATTTGACGATTTACAGTTAACTTCACTTCCTGACATTCCAGACCTGCCGGCCTGGACAACAGAAGAACATGATGAGACTCCATGTGATGGTTCAAAAGATTCCATTACTTGCAAGGATGGCTATCTGGAAGAACTGTCCAATTCACTCTTAAACTTCAATGACGAGGAAGAGCTATTTCTGATGGATTCTGTCGGAAAAAATGGGATTGGTAAATCTTATTATGATGGTCTGAGTTCACTTTTACTAAACTCTCCAATTGATGGTTGTTCAGCTCAGATACCTGAAACAGCTGAAGGAGAGTTATTATTGACCTCAAGTGAAGATGCTAAAAATCCGTCCGTTTCATGTTGTGCAGAAGTAGATGACAATGCAGGAAAGGCTGAAACAGAGTTGTTAATGACCTCTGATGCACATGTTAACGATCCGTCAGTTTCATGTTGTGCTGAAGTAGATTTCAACTCAGTCTCGCAATCTAATGGGTTGGAAGTAGTTCACAAACCAGAGTTCCAGATGCCAACTTCTGCCTCAGCTAAAGACCCTCAATTTCCTGAACTAATCGGCGGAGTTATTTTCTGTAGATTAAATACTGAGGACCCAGATGTTCCATCCAATGATGATGTTTTCCTACCCTTTAATGAGCCTCCCCCAACAATTTCCTCTTCATCTGAATCAGCTGCTAGAAAATCCAATAAACCAGTTCCATCATCTGTTAATGATTATGGATATAGAGCTAACGGACGAGGTAAAGTTTTGATGCAGGTTGAACAAAAAACCTCCGTAGGAGCTCACGTGTCTTCTCGAACAGCAGGAGCTTGTGGCCTTCCAGGACCTGTTTCTGATTCTAAGATTAAACATGAGTTGTCTAATACTCATGCATCACACACACTGTCCAGGAGTGCAGTTATTGCTTCCATTGGACTAGGTGGAAACAATGATGCATCAAACAAAACTCATGCTGCTCTACATGCAAACCCAGAGGAAAATGTTGCCAATGCTAGCTTCGTAAAGCATCTGAGCAATAATGTCACAAATTTGTCACATAAAAAACCAGCTCTTGGAAATGGCTTCAGAAATCATGTCCAACATAATGGTGCTAGCTTGAAACAGGAACAAGATGTAGCTTTGCCAGTTGAAGATAATCAGTTGCAAATTGATATAATGGGATCTGCAGACGTTCTGGGGTCAGAGCTTGTGATTGATCCTCAAAATTCAGATGAGGAGGAAGAAGATATTGAAAGCGATGATGATATTCCTTATTATTCTGATATAGAGGCCATGATACTTGATATGGACTTGGAACCCGATGATCAGGATTTATATGATAATGAAGAAGTATCAAGATATCAACATGAGGAAACAAAGCAGGCTATCATAAGGCTGGAGCTGGGTGTTCATTCATATACGCAGAGAGACATGGCAAAACATGGAGCATTGGCCCTATTATATAGTCGCCGCTCAAAGTTCTATATCACAAAAACTGAGGTTTTACTTGGACGAGCAACTGAAGGTGCTCATGTAGATATTGACTTAGGCAAAGGAGGGTGTAGCAATCTAATATCTAGACGCCAGGCAATCATAAAGATGGACAAAGACGGATCATTCTACATTAAAAATGTTGGAAGGTGTTTGATGCTGATAAATGAAAAAGAATTGCCCACTGGTCAAACTCAAAGACTAGATTCTAATTATCTGATTGAGTTGAAGGGCAAACAATTCATATTTGAGATAAATGAAAGTCGTATGAAGCAGTAG 2613 0.3969 MGALATFSSPWTPDDDLLLRNAIESDASLESLAKGAVQFSRKFSRAEIHERWHFLLYDPSEVSASMLDNKSGHSKEQKIVSDKRKPQSVRDSYYAMRKRIRRDMPTSMDCNFLVDPEDGDYLVNGDEHLPENGVPEGSSFNHFTNHDLSSENCIPEDPTLNHFSNQDPSQYVLPENIMDIEVAINGTTTQGFYNGVDDIIEENFPTDQNNIPQEEPQILEDNVPLNGAADELDVPIELDIDNFIRDDDLEDMSLSAFNQINHDPANLCSEFDEDCMFDSPELECGNSFDDLQLTSLPDIPDLPAWTTEEHDETPCDGSKDSITCKDGYLEELSNSLLNFNDEEELFLMDSVGKNGIGKSYYDGLSSLLLNSPIDGCSAQIPETAEGELLLTSSEDAKNPSVSCCAEVDDNAGKAETELLMTSDAHVNDPSVSCCAEVDFNSVSQSNGLEVVHKPEFQMPTSASAKDPQFPELIGGVIFCRLNTEDPDVPSNDDVFLPFNEPPPTISSSSESAARKSNKPVPSSVNDYGYRANGRGKVLMQVEQKTSVGAHVSSRTAGACGLPGPVSDSKIKHELSNTHASHTLSRSAVIASIGLGGNNDASNKTHAALHANPEENVANASFVKHLSNNVTNLSHKKPALGNGFRNHVQHNGASLKQEQDVALPVEDNQLQIDIMGSADVLGSELVIDPQNSDEEEEDIESDDDIPYYSDIEAMILDMDLEPDDQDLYDNEEVSRYQHEETKQAIIRLELGVHSYTQRDMAKHGALALLYSRRSKFYITKTEVLLGRATEGAHVDIDLGKGGCSNLISRRQAIIKMDKDGSFYIKNVGRCLMLINEKELPTGQTQRLDSNYLIELKGKQFIFEINESRMKQ 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05646 870 MobiDBLite consensus disorder prediction 501 523 - -
Trre5g05646 870 ProSiteProfiles Forkhead-associated (FHA) domain profile. 782 838 IPR000253 GO:0005515
Trre5g05646 870 Pfam FHA domain 783 854 IPR000253 GO:0005515
Trre5g05646 870 SUPERFAMILY SMAD/FHA domain 762 863 IPR008984 GO:0005515
Trre5g05646 870 Gene3D - 721 870 - -
Trre5g05646 870 MobiDBLite consensus disorder prediction 490 528 - -
Trre5g05646 870 Pfam N-terminal region of micro-spherule protein 11 61 IPR025999 -
Trre5g05646 870 PANTHER MICROSPHERULE PROTEIN 1 8 870 IPR037912 GO:0002151|GO:0031011|GO:0071339
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05646 Trre-Chr5 56565582 56570689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05646 - - tpra:123898987 1529.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05646 5 56565582 56570689 Trre5g05646 5 56565582 56570689 ECH