Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05644 ATGGTTGTTCTCGATGTTAAAATATACGGTCAGTGGTTTACTAAAGGGAAAAGGTTTTTAACAACGGCTGCGAATCCGACAAGTCAGTTAACAGTTATAGGAAATTTGATTGGAGCACAAGCAGCAGCACAAATGGGTTGGAAAGAAAGTGCTGTTTGTATGTTTTCATTAGGGATGGTGCATTATTTGGTGTTATTTGTAACACTTTATCAAAGGTTGTCTGGTGGTGATCGTCTTCCTGTGTTGTTAAGACCAGTTTTCTTCTTGTTCATTGCAGCACCTGGTGTGGCTAGTTTGGCTTGGGAATCTATTGTTGGAGATTTTGATACCTTTTCCAAGATGCTATTCTTTTTGTCTCTATTCCTCTTCATGTCACTGGTTTGCAGGCCAGCCCTATTCAAGAGATCTATGAGAAGGTTCAATGTTGCATGGTGGGCATACTCCTTTCCTGTTACCGTACTTGCTATGGCTTCCACAAATTATGCACAACAAGTCAAAGGAACTGTTTCACATATCTTAATGCTAATTTTCTTGGCACTTTCTGTTTTGGTCTCTCTTTCTCTCACGGTCTTCACTTTGATCAATTCTAGGATGCTTCTACCAGATAATGATCATCCCACTGCAAGTTTGCTTATTGTTTAA 642 0.3956 MVVLDVKIYGQWFTKGKRFLTTAANPTSQLTVIGNLIGAQAAAQMGWKESAVCMFSLGMVHYLVLFVTLYQRLSGGDRLPVLLRPVFFLFIAAPGVASLAWESIVGDFDTFSKMLFFLSLFLFMSLVCRPALFKRSMRRFNVAWWAYSFPVTVLAMASTNYAQQVKGTVSHILMLIFLALSVLVSLSLTVFTLINSRMLLPDNDHPTASLLIV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05644 213 Pfam Voltage-dependent anion channel 5 193 IPR004695 GO:0016020|GO:0055085
Trre5g05644 213 Gene3D - 1 200 IPR038665 -
Trre5g05644 213 PANTHER S-TYPE ANION CHANNEL SLAH3 2 206 IPR030183 GO:0006873|GO:0008308|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05644 Trre-Chr5 56541010 56544007 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05644 K26672 - gmx:100787036 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05644 5 56541010 56544007 Trre5g05644 5 56541010 56544007 ECH