Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05629 ATGGCATTTCCAATTACACAGCTTATCCCTTCATCAACATCACCGTTTCTACCTTACAACTTTCCTTTGTTAAACCTCACTCCACTCAGTCCACTTTCCTTAAACCCTAAAATTCCATTCTCAACACCTACTACGCCGCCGCCGCCGTATTTTAATGTTCTCCACCACTCTCGCCGCCGGAAAGCTACTTCGAATCTCCGATGTTCGGCTTCTTTCCCGGAGAAGAATTATTCCAACTCTTCCAGCTCAGAAGACGATGTAACGGAACTCCCTCTGTTTCCTCTTCCTTTAGTTCTCTTCCCCGGAGCAATCCTTCCTCTCCAGATCTTCGAGTTCCGTTACCGTATCATGATGCAGACACTCCTCCACACCGATCTCCGATTCGGCGTAATCTACACCGATCCAGTTTCAGGAACAGCTGAAGTAGGTTGCGTAGGAGAAATCATAAAACACGAACGACTCGTCGATGATAGATTCTTCTTGATCTGTAAAGGTCAAGAACGTTTTCGTGTCACGAAAGTTGTTCGTAAGAAACCCTATCTTGTTGCTCGTGTGGCGTGGTTGGAAGATAGACCTTCACCATCTGCTGACGTGGATGTTGACGGTTTAGCGAACGAAGTGGAAACTTACATGAAAGACGTTATTCGATTATCGAATCGATTAGGTGGAAAAGCTGAAAAAGAAGTTGGTGATTTGAGAAGGAACTTATTCCCAACGCCGTTTTCGTTTTTTGTTGGAAGCACTTTTGAAGGAGCTCCTAGAGAGCAACAAGCTTTGTTGGAATTGGAAGATACTGCAGCAAGATTGGCGAGGGAAAAAGAAACTCTGAAGAATACGCTTAATTATTTATCTGCTGCTTCTGCTGTTAAAGATGTTTTTCCGTCTTCATCTTCGCCTTCTTCTCCGTCTTAG 912 0.4441 MAFPITQLIPSSTSPFLPYNFPLLNLTPLSPLSLNPKIPFSTPTTPPPPYFNVLHHSRRRKATSNLRCSASFPEKNYSNSSSSEDDVTELPLFPLPLVLFPGAILPLQIFEFRYRIMMQTLLHTDLRFGVIYTDPVSGTAEVGCVGEIIKHERLVDDRFFLICKGQERFRVTKVVRKKPYLVARVAWLEDRPSPSADVDVDGLANEVETYMKDVIRLSNRLGGKAEKEVGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAARLAREKETLKNTLNYLSAASAVKDVFPSSSSPSSPS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05629 303 Gene3D - 87 190 IPR046336 -
Trre5g05629 303 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 58 298 - -
Trre5g05629 303 Coils Coil 259 279 - -
Trre5g05629 303 ProSiteProfiles Lon N-terminal domain profile. 90 278 IPR003111 -
Trre5g05629 303 Pfam ATP-dependent protease La (LON) substrate-binding domain 89 277 IPR003111 -
Trre5g05629 303 SUPERFAMILY PUA domain-like 89 277 IPR015947 -
Trre5g05629 303 SMART lon_5 89 278 IPR003111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05629 Trre-Chr5 56429280 56430191 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05629 - - tpra:123894620 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05629 5 56429280 56430191 Trre5g05629 5 56429280 56430191 ECH