Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05599 ATGGTTGCCGAAAGTTTTTGTCAGAACCACCAAAACATTGAAGGAGAAGAAGAAGAAGTAAAAGCTCCTTTCATATTAGGTCTTCAACCATCTGCACTCGTTGACAACGTTGCTCATGTTGATTTGTCCTTGCTCGATCGAATTCCCGGCGAACGCGGTGGCTCCATTCCCGTTGCAATTGAAGAGCTTGAACATATACTGAGGGAAATTAAATCTAATTCCTCTGATGATGATTCTCATTCTTCTATGATGAAAACTATGGCTGGTGGAAGTGTTGCTAATACAATTCGTGGTCTTAGTAGTGGTTTTGGGATTTCTAGTGGAATTATTGGGGCTTGTGGTGATGATGAACAGGGTCAATTATTTGTTAATAATATGTCCTCTAATGGTGTTGATCTTTCTAGACTCCGTAAAAAGAAAGGACACACTGCACAGTGTGTTTGCTTAGTAGATGAGTTGGGTAACAGAACAATGCGACCCTGTCTCTCAAATGCTGTCAAAGTTCAGGCTCAAGAATTGTTGAAAGAGGATTTCAAAGGCTCCAAGTGGTTGGTGTTGAGATATGCAATACTCAATTTGGAAGTTATTCAAGCAGCCATTGCTTTGGCCAAACAGGAAGGTCTCCTTGTTTCTCTGGACTTGGCCAGTTTTGAGATGGTCAGGAACTTTAAACAGCCACTTCTGAAGTTGCTGGAATCCGGAAACATAGACCTCTGCTTTGCCAATGAGGATGAGGCAACGGAACTTTTAAGGGGTGAACAGAATGCTGATCCAATAGCTGCTGTAGAATTTCTTGCCAAATACTGCCAATGGGCTGTGGTAACATTGGGATCTAATGGATGCATTGCTAAACATGGGAAGGAGATGATACGTGTCTCGGCCATAGGGGAATCAAAGGCAACTGATGCTACAGGAGCAGGAGACCTTTTTGCAAGTGGATTTTTGTATGGGGTGGTCAAGGGCTTGCCACTAGAAGAATGCTGCAAAGTAGGCACATGCAGTGGTGGATCCGTCATTCGCTCTCTTGGGGGTGAGGTGACATCTGAGAATTGGCAATGGATGTACAAGCAGATGCAAGTACAGGGTCTACCTACGCCAAATGGCTTATGA 1110 0.4369 MVAESFCQNHQNIEGEEEEVKAPFILGLQPSALVDNVAHVDLSLLDRIPGERGGSIPVAIEELEHILREIKSNSSDDDSHSSMMKTMAGGSVANTIRGLSSGFGISSGIIGACGDDEQGQLFVNNMSSNGVDLSRLRKKKGHTAQCVCLVDELGNRTMRPCLSNAVKVQAQELLKEDFKGSKWLVLRYAILNLEVIQAAIALAKQEGLLVSLDLASFEMVRNFKQPLLKLLESGNIDLCFANEDEATELLRGEQNADPIAAVEFLAKYCQWAVVTLGSNGCIAKHGKEMIRVSAIGESKATDATGAGDLFASGFLYGVVKGLPLEECCKVGTCSGGSVIRSLGGEVTSENWQWMYKQMQVQGLPTPNGL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05599 369 SUPERFAMILY Ribokinase-like 32 344 IPR029056 -
Trre5g05599 369 Pfam pfkB family carbohydrate kinase 73 344 IPR011611 -
Trre5g05599 369 CDD adenosine_kinase 23 343 - -
Trre5g05599 369 Gene3D - 29 348 IPR029056 -
Trre5g05599 369 PANTHER SUGAR KINASE 17 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05599 Trre-Chr5 56209871 56213003 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05599 - - psat:127080309 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05599 5 56209871 56213003 Trre5g05599 5 56209871 56213003 ECH