Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05594 ATGGCAGAGAAGAGCAAGATATTAATAATCGGAGGGACGGGGTATATCGGTAAACATATAGTGGAAGCAAGCGTAAAGGCTGGACATGAAACTTTTGCTTTGGTAAGGGAATCCACCATGTCTGATGATTCTGACCCCACCAACACCAAGGCTAAGCTCCTCCACAATTTCAGAACTATGGGAGTTAATTTGGTCCTTGGGGATCTCTACGATTATGAGAGTTTGGTGAAAGTAATTAAGCTGGTAGATGTGGTCATATCTGCTGTCAGTCACACACAAGCCGCTGATCAGGTGAACATCATTGTTGCCATTAAAGAGGCTGGTAATGTTAAGAGATTTTTTCCTTCAGAATTCGGGAACGATGTTGATCGTGTCCATGCCGTTGAGCCAGCAAAATCTGTATTTGCTGTAAAAGCCCAAATTCGTCGAACGATTGAAGCTGAAGGCATACCCTATACATATGTATCAACCAACTCCTTTGCTGGCTATTTTGTACCTTCATTTGTCCAACCTGGTGCCACAGGACCACCAAGAGAGAAAGTCATTATCTTGGGCGACGGCAATAAAAAAGCGGTGTTCAACAAGGAAGAGGACATTGGAACCTACACTATTAGAGCCGCGGATGATCCAAGGACATTGAACAAAATTCTCTACCTCAGGCCTCCTAACAACATTTACACATTCAATGAAGTTGTTGCCTTGTGGGAGAAGAAGATTGGGAAGACCCTCCAAAAAATCTACGTTCAAGAGGATAAACTTCTCGAGGATATTGAAGATACACCTTTTCCAGATAATGTAGGGTTAGCAATCTGTCATTCAGTGTTTGTGAAAGGTGACCACACTAACTTTGAGATTGAGCCTTCTTTTGGGGTTGAGGCTTCTGCTTTATACCCGGATGTCAACTACACTACTGTGGATGAATCTCTTGATCACTTTCTTTGA 942 0.4278 MAEKSKILIIGGTGYIGKHIVEASVKAGHETFALVRESTMSDDSDPTNTKAKLLHNFRTMGVNLVLGDLYDYESLVKVIKLVDVVISAVSHTQAADQVNIIVAIKEAGNVKRFFPSEFGNDVDRVHAVEPAKSVFAVKAQIRRTIEAEGIPYTYVSTNSFAGYFVPSFVQPGATGPPREKVIILGDGNKKAVFNKEEDIGTYTIRAADDPRTLNKILYLRPPNNIYTFNEVVALWEKKIGKTLQKIYVQEDKLLEDIEDTPFPDNVGLAICHSVFVKGDHTNFEIEPSFGVEASALYPDVNYTTVDESLDHFL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05594 313 Gene3D - 159 308 - -
Trre5g05594 313 Gene3D - 6 299 - -
Trre5g05594 313 Pfam NmrA-like family 7 302 IPR008030 -
Trre5g05594 313 CDD PCBER_SDR_a 6 307 IPR045312 GO:0016491
Trre5g05594 313 PANTHER PINORESINOL REDUCTASE-RELATED 3 312 - -
Trre5g05594 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 282 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05594 Trre-Chr5 56195113 56197744 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05594 K23050 - gmx:100813308 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05594 5 56195113 56197744 Trre5g05594 5 56195113 56197744 ECH