Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05589 ATGCAGCTGAAAGGGTTGGAGAATGTTACAGTTTCAGAGGTACTAATGACAAAGGGGGAAGAGAAAGTGGGTTCCTGGCTTTGGTGCAGAGCTGATGATGCTGTTATTAATGCAATGAGGAATATGGCTGAAAATGATATTGGATCATTGGTAGTACTAAGGCCAGAGGGTCAGCACATAGCAGGCATTGTCACAGAAAGAGATTGCTTGAAGAAAATAGTTGCACAAGGAAGATCACCTTTATACACTAAAGTTGGTCAAATAATGACTAACGAGAATGACCTGGTAACGGTGACATCTGACACGAACATTCTAAGAGCAATGAGACTTATGTTAGAGAATCGAATCCGACATGTTCCAGTTATAGATGGGAAAATAGTTGGTATGATTTCAATTGTAGATGTGGTGCGAGCAGTGACGGAGCAACAAAGTGGAGAATTGAAGCGACTCGGTGATTATATTAGAGGAGAATACTATTAG 480 0.4083 MQLKGLENVTVSEVLMTKGEEKVGSWLWCRADDAVINAMRNMAENDIGSLVVLRPEGQHIAGIVTERDCLKKIVAQGRSPLYTKVGQIMTNENDLVTVTSDTNILRAMRLMLENRIRHVPVIDGKIVGMISIVDVVRAVTEQQSGELKRLGDYIRGEYY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05589 159 CDD CBS_pair_bac_euk 29 137 IPR044725 -
Trre5g05589 159 SMART cbs_1 94 140 IPR000644 -
Trre5g05589 159 SMART cbs_1 25 74 IPR000644 -
Trre5g05589 159 SUPERFAMILY CBS-domain pair 24 145 IPR046342 -
Trre5g05589 159 ProSiteProfiles CBS domain profile. 89 147 IPR000644 -
Trre5g05589 159 Pfam CBS domain 27 74 IPR000644 -
Trre5g05589 159 Pfam CBS domain 85 139 IPR000644 -
Trre5g05589 159 ProSiteProfiles CBS domain profile. 16 81 IPR000644 -
Trre5g05589 159 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL 5 158 - -
Trre5g05589 159 Gene3D - 4 158 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05589 Trre-Chr5 56175205 56176491 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05589 - - gmx:100778020 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05589 5 56175205 56176491 Trre5g05589 5 56175205 56176491 ECH