Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05580 ATGCGAATTCTTAAGAAGCCATTCTCATTTTCTCTCTCTTACTTCTCTCCTAAACTCGTAGCACCTCTTTTATCTTCTCGGATTTGCTTTGCATTTGGAATTTCCGATAAACCTTCACGCCCCTTCGCCAACATCGGATCACCAGGAGCTAAGCAATTGCATTCTCAATATTCAATGGATGAGAACCATGATGTTGGTATACATGACCCAAGATCAGTGGATTTGCCTGGCAGTGATAGTGGAAAACAGCCACGTGTATGGTCATCTTCTCCTGAACATGGATCAAAAACTCATAGAGGCAAACAGATATTTTGTAACCGGTCACTGAATATGAAGAACATTGTTGCTGTGGGATTTGACATGGATTATACTTTGGCACAATACAAGCCCGAAACTTTTGAATCCCTTGCATACCAAGGCACAATTAAAAAGCTGGTTTACGATTTGGGATATCCTAGTGAGTTACTAAATTGGTCTTTTAACTGGAAGTACATGGTCAGGGGCTTGGTACTTGACAAAAAAAGAGGAAATATCTTGAAGATGGATCGCCACAAGTATGTGAAAGTAGCTTATCATGGATTTAGAGAGTTGTCAAAAGAAGATAAAGTTGGGACCTATGGAAATACTTTAGTACGTGATTCATTTGACGAGCCAGACTATGCTCTAATTGATACACTTTTTTCTCTCGCGGAAGCCTACTTGTTTGCTCAACTGGTTGATTTTAAGGATTGTAATCCTGGAAAGATTCGAGAGGGCGTTGATTATGCTCGGATGTATAAAGATGTTCGAGCTGCAGTTGATTTGTGCCACCGTGATGGGACTTTGAAGCAAATGGTTGCTAAAGATCCTGGAAGGTATATTAATGAAGACACCATGATAGTGCCTATGCTGGAAATGCTCAGAGAATCTGGACGTGCAACATTCTTAGTTACAAATAGTTTATGGGACTATACAAACACCGTCATGAATTTCCTCTGTGGATCCAGAATGATAGGTGGCAGTAACAATTTTGACTGGCTTCAATACTTTGATGTTGTCATCACTGGCAGTGCAAAGCCAGGATTTTTTCACGAGGAAAATCGTGCCAACCTATTTGAGGTTGTGCCTGAGACTGGAATGCTACTCAATACAGATAATGGCTCTCCTATGCCTCAGGTGGGGAACATCTCAGCAAGGTTATTCACTGAAGCAAAGAATCAAGCTTGCCAAGTTTTCCAGGGAGGCAATGTCGCTCATCTGCATAAACTGCTTTCCATTGAATCAAGTTCACAGGTTCTGTACGTTGGGGATCACATTTATGGCGACATACTACGTAGCAAAAAGGTTCTTGGATGGAGAACAATGCTTGTAATTCCAGAGCTGGAGAAGGAGGTTAAACTCCTCTGGGAATCAAGGGACACACGAAAGGAGCTTCAATTCTTGAGGAGTGAACGTGATCGTATTGAGGATGAAGTACATCATTTGAAGTGGTCTCTCAAATTCAAGAACCCAGATGCTGATGCCAAGCAGAAGCTATCTTCAGCACTTAATAAACTGGAGCTTGAAAGAGAGAAAATGCGATTAATTCATCAAGAAGCTCAAAGAAAATCACATCAAAGGTTTCATGAACCATGGGGGCAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCCTGCCTTTATACTAGCCAAGTATCTAACCTGGCCTTGCACTCTCCAGACAAGTATTACAGACCTAGCGAAGATTTTATGCAGCATGAATTTGGCATTCTGGGTTCTGAGCCACGTGAAATGTAA 1800 0.4144 MRILKKPFSFSLSYFSPKLVAPLLSSRICFAFGISDKPSRPFANIGSPGAKQLHSQYSMDENHDVGIHDPRSVDLPGSDSGKQPRVWSSSPEHGSKTHRGKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTIKKLVYDLGYPSELLNWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVGTYGNTLVRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDCNPGKIREGVDYARMYKDVRAAVDLCHRDGTLKQMVAKDPGRYINEDTMIVPMLEMLRESGRATFLVTNSLWDYTNTVMNFLCGSRMIGGSNNFDWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMPQVGNISARLFTEAKNQACQVFQGGNVAHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEKEVKLLWESRDTRKELQFLRSERDRIEDEVHHLKWSLKFKNPDADAKQKLSSALNKLELEREKMRLIHQEAQRKSHQRFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLALHSPDKYYRPSEDFMQHEFGILGSEPREM 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05580 599 Pfam 5' nucleotidase family 103 589 IPR008380 -
Trre5g05580 599 Coils Coil 502 529 - -
Trre5g05580 599 FunFam Cytosolic purine 5-nucleotidase 263 480 - -
Trre5g05580 599 SUPERFAMILY HAD-like 101 590 IPR036412 -
Trre5g05580 599 CDD HAD_cN-II 104 475 - -
Trre5g05580 599 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 97 588 IPR008380 -
Trre5g05580 599 Gene3D - 99 149 IPR023214 -
Trre5g05580 599 Gene3D - 263 480 IPR023214 -
Trre5g05580 599 Coils Coil 464 484 - -
Trre5g05580 599 NCBIfam HAD-IG family 5'-nucleotidase 103 471 IPR008380 -
Trre5g05580 599 MobiDBLite consensus disorder prediction 68 99 - -
Trre5g05580 599 PIRSF NT5C2 79 598 IPR016695 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05580 Trre-Chr5 56133915 56140683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05580 - - gmx:100793438 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05580 5 56133915 56140683 Trre5g05580 5 56133915 56140683 ECH