Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05572 ATGAGAAAATTGTGTCCAAATTTTGACAAGGAAAATGGGTTGGATACGGTTCTTGAGGTTCCAATTCCGGAGGAAATGTTGACAAATATGGGAACCAATGGGTTCAATCGTTGGCAGAACCTTAAAACTCTAATGAACAATGCTCAAGTTGCCGATAAGTCATCAGGTTTATCTGCACCCACAAATAATGAATTCACCGCATTGCTTAAGCTTGTTGGTGCCCCTCTTATTCCTCTTCAGGTTCAATCCGACAATACTTTGACTCGACCCCTTAGAGATTGTTCCATTAGAGATTCAATTGGAAAGTACATAGTACAGCAGTATGTGGCAGCAACAGGAGGACAAGGTGCATTGAATTCATTGAAAAACATGTATGCAATGGGAGAAGTTAGAATAAATGGATCGGATATGCGTCATGGTGCCGATGATAATAGCGTTAATTCAAGAGGCAAAGCTGAAGTAGGAGGTTTTGTGTTATGGCAACAGAATCCAGATTTATGGTGCTTAGAATTGGTTGTCTCTGGTTTCAAAATTACTGCTGGTAGTAATGGAAAAGTATCCTGGAATCAGTCCTCTTCTCAACCTTTTCATTCAAATAAAGGCCCTCCTAGACCCCTTCGCCGCTGCTTCCAAGGATTGGATCCAAGGTGTACAGCTAATTTGTTCCTAGATGCTGAATGTGTAGGGGAAAACGAAATTAACAACGATGTGTGTTTCATGTTAAAATTACAAACTGAGCAACATATCCTTCAAGCTCAAAGCACATCAAACACTGAAATCGTTATGCACACAATAATCGGTTACTTTAGCCAACGCACAGGACTACTTGTTAAATTTGAGGACACCAAATTGGTGAGAATGAAACCTGTCAAAGGAAAAGACTCCGTATTTTGGGAAACAACCATCGAGTCTACGATCGAAGATTATAGATGTGTTGGTGGCATTAATATAGCTCATGGTGGGAGGACAGTTTCGACACTTTATAGGTATGGCGCAGCGCATAATCATAAACAGATGATTGAGGAAATATGGAGTATTGAAGAAGTTGATTTCAATATTTTTGGATTGTCTATGGATTGTTTTCTTCCTCCATCTGATCATGAGAAAGAACATGATGGTGCAGAGCATACAGTGGGAGTGAGCTCTGTCACCCTCAAATGGTCCACAAACAACATCAATAAATTCTCAGATTACTTGGATTCAATGATTCTTGATGATCTAGACGTGTTGGAAGTGGAAGAGAGGGAGAAGGTGGTGAGGCACATGTGGGATGTGTACACTCGCAGTCATAGTAACTCTATTGGATTACCTCAGTTTTGGTTGGAAGCTTTTGAAGCTGCTTATGAGCACTTGGTCAGTGATGTTCCTGCAGTTCGAGACGCTGCTGTTTCAGAAATTGCCAAGATGTCACTAGCACTGCGCTCACACATTTTACACCAACTTCCACTTCAACTTCAACCACCATTGAGCAGCAAGAGATCAAGAAAACTTAAGCAAGAAAAGAGTCAGATGGAATTGGATCATTATGAAGACCATGCATTCAAAATAATCCCTCCCCGTCCTTATAATCTTACCTCCCAAATGAATATAACTGTATGA 1599 0.4059 MRKLCPNFDKENGLDTVLEVPIPEEMLTNMGTNGFNRWQNLKTLMNNAQVADKSSGLSAPTNNEFTALLKLVGAPLIPLQVQSDNTLTRPLRDCSIRDSIGKYIVQQYVAATGGQGALNSLKNMYAMGEVRINGSDMRHGADDNSVNSRGKAEVGGFVLWQQNPDLWCLELVVSGFKITAGSNGKVSWNQSSSQPFHSNKGPPRPLRRCFQGLDPRCTANLFLDAECVGENEINNDVCFMLKLQTEQHILQAQSTSNTEIVMHTIIGYFSQRTGLLVKFEDTKLVRMKPVKGKDSVFWETTIESTIEDYRCVGGINIAHGGRTVSTLYRYGAAHNHKQMIEEIWSIEEVDFNIFGLSMDCFLPPSDHEKEHDGAEHTVGVSSVTLKWSTNNINKFSDYLDSMILDDLDVLEVEEREKVVRHMWDVYTRSHSNSIGLPQFWLEAFEAAYEHLVSDVPAVRDAAVSEIAKMSLALRSHILHQLPLQLQPPLSSKRSRKLKQEKSQMELDHYEDHAFKIIPPRPYNLTSQMNITV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05572 532 Pfam Protein of unknown function (DUF620) 124 364 IPR006873 -
Trre5g05572 532 PANTHER LIPASE 1 369 IPR006873 -
Trre5g05572 532 Pfam Protein of unknown function (DUF1195) 381 472 IPR010608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05572 Trre-Chr5 56083307 56087459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05572 - - mtr:25490183 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05572 5 56083307 56087459 Trre5g05572 5 56083307 56087459 ECH