Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05570 ATGGATAGCGACGAAGATTTTCAACCTATGCCTTCTTCTCCCATCGTCGAACGAAAGCTTAAGCGTTTGAAAAAGGCATCTAGGGTTTCCGAAATTCCTCTCCCTTCGTCTCCCCCTATCAAATCCCCCAAATTCGAAAACAATTCTGCCTTGGAAAATTCAATTGCACGATCCGCCACTGAAATTGAAAGTTTAGATGTTAAGAATGTCACTGAAACCGTGGAGGAAGATGATTTGGGTGCGAAGAGAGTTTTGGAGTTTGATTCTGTGGACGATGAACTTGACGGAAAGATAACGGAGAAGACAACGGAAGAATTAGAGGAAAAACATACCGACGAATCAGAAATTAAGCAAACTAGTGTTGACGATGTTTCGAAGGAGAAAGGGAATAAGAAGAAAAAGAAGAGGGTTGATGACGGTGATGGAAATGAGAAGAAGCTTAAAGAATCCAATAAAAGAAAAGCTGAGAAGGAAAGACGGGAAAATCTCAAAAAGCTTCGAGCTGAATCTCAGAGACTTCTTCGAGAAACAAGAGATGCTGCATTTAAACCCGCTCCTTTGGTTCAGAAGCCGATTTCGTCTATACTGGATAAAATTCGAAAGAGAAAATTAGAGTTCTTAAAGAAATCTAATGTTTCTTTTGATGATAACGATGATGATGATGATGACGATATTCCCGTGGATATTGATTCTGAGCCTCCCAGTCGGAGTGAGGAGACAACTAACAAGATCGAAAATGTTGAGCCCAAAGGAACACCAGCTGCATGTCCGGAAGTCACAGAGAATGATTTAAGCACGCCACATATTGATGGATCGATCAATGCTGCAGAACATTCGAGCCGTGAAAGCATACCTTCTCCCAAGGCTGTGGGTTCAGAATCTGTACATGCATTTCGAGCTCCTGTTGATGATACTCAGGATCTCTTTTCTGATTCTGAAATAAATGAAATTAAAGAAGAGGCTTTAAATGCGAAGTTGAATAAGCCTTCGGAAGAAGTGTTTGCCCCATCTATGCTTGCAATGAACTTGAAATTTGATTCTGCTCCTCTTGACGATGATATCTCTTCTGATGACGAGGAGAATGACAGGGAGAACAAAGTAACACATTTACCTAGATCAGCTGACGCTACTTCACCTCCAAATGGTGACCCTGTTAAGGCTTTTGTTGACGAAGAAGCCGAAGAGGAAGATGACAGTGACAATGATTTACAACGCTTCCAAGACAATGAAGAAGGTGAGGATGATGATGATATTGAGGAGCTTAATGATATGATTGCAACTGGATATGAAGAAAATTCAATTGATAGAGAAAAGCGTGACCAACTCCATCAGCAATGGCTTGAGCAGCAGGATACAACCGGGATGGATAGTCTACTTCAGAAACTTAATTGTGGTTCAAGATTGAAAGAATCTGACGATGAAGAGGAAGATGAGGAAAGCAAAGAAACTGATAATGAATCTGACAATGAATCCGACGATGAAGCTGAAGACTTCACTGCTCCATCTGATGCTGTGAAGATAAATCTGAAAAAGGTGAAGCAGATGATCCCGCAGATGTTTACGGATAAAGACGAACCATATGTATCATCTGATGAGGAAACTGAGGAGAGGCTAGCTAAACAGTGTCTCTCTTTAAGAGTTGAGGAGAAAGCTCAATTCTTTTCACCGGCTGAAGATGAAAGTAGCAGGGGAGTTTTCAATCTCATAAAGAAATTAAATGTTGTGCCTGATACCAAGAGAAAAGGAAGAACTCCTTCCATATTTGAAATGCCACACATCGGAAAAAACACAAATATATCATCAAAGTCATCTTTTGTTGGTCGAGGTTCAAATCAATTTGTACCTTCTTCTAAAAAGCATGGAACAAGCAAGGTCCGATCATCATTTATATTTGGGCGAGATGACAGCAACAGCAGACCTTCATTGTTGATATCAGAGGATTCTTCAGATACGATTGTAAGGGAGAGTCAAGCACCCAAAGTTGTTTCTGCCAAATTCCAAAGAAATACACAGATCAAATATACCACTTCAAATTCTAAACCCCAAGAGTCAAAAGTATCACTATTGGAGGTATTAAGAAGATCATCACATCATACAGAGCGTTGTGTCCAGAATGCTGGAGTTCAGCAAAATGAATCTGTATTCGAAGCATTTAAGTTAAAGAAAAAGTCAATTAAGATAGGTGATAGAGTTTGA 2196 0.3998 MDSDEDFQPMPSSPIVERKLKRLKKASRVSEIPLPSSPPIKSPKFENNSALENSIARSATEIESLDVKNVTETVEEDDLGAKRVLEFDSVDDELDGKITEKTTEELEEKHTDESEIKQTSVDDVSKEKGNKKKKKRVDDGDGNEKKLKESNKRKAEKERRENLKKLRAESQRLLRETRDAAFKPAPLVQKPISSILDKIRKRKLEFLKKSNVSFDDNDDDDDDDIPVDIDSEPPSRSEETTNKIENVEPKGTPAACPEVTENDLSTPHIDGSINAAEHSSRESIPSPKAVGSESVHAFRAPVDDTQDLFSDSEINEIKEEALNAKLNKPSEEVFAPSMLAMNLKFDSAPLDDDISSDDEENDRENKVTHLPRSADATSPPNGDPVKAFVDEEAEEEDDSDNDLQRFQDNEEGEDDDDIEELNDMIATGYEENSIDREKRDQLHQQWLEQQDTTGMDSLLQKLNCGSRLKESDDEEEDEESKETDNESDNESDDEAEDFTAPSDAVKINLKKVKQMIPQMFTDKDEPYVSSDEETEERLAKQCLSLRVEEKAQFFSPAEDESSRGVFNLIKKLNVVPDTKRKGRTPSIFEMPHIGKNTNISSKSSFVGRGSNQFVPSSKKHGTSKVRSSFIFGRDDSNSRPSLLISEDSSDTIVRESQAPKVVSAKFQRNTQIKYTTSNSKPQESKVSLLEVLRRSSHHTERCVQNAGVQQNESVFEAFKLKKKSIKIGDRV 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05570 731 MobiDBLite consensus disorder prediction 348 503 - -
Trre5g05570 731 MobiDBLite consensus disorder prediction 389 424 - -
Trre5g05570 731 MobiDBLite consensus disorder prediction 90 170 - -
Trre5g05570 731 MobiDBLite consensus disorder prediction 26 52 - -
Trre5g05570 731 MobiDBLite consensus disorder prediction 430 445 - -
Trre5g05570 731 MobiDBLite consensus disorder prediction 229 245 - -
Trre5g05570 731 MobiDBLite consensus disorder prediction 209 309 - -
Trre5g05570 731 PANTHER DNA LIGASE-LIKE PROTEIN 1 730 - -
Trre5g05570 731 Coils Coil 152 180 - -
Trre5g05570 731 MobiDBLite consensus disorder prediction 265 287 - -
Trre5g05570 731 MobiDBLite consensus disorder prediction 175 194 - -
Trre5g05570 731 MobiDBLite consensus disorder prediction 446 460 - -
Trre5g05570 731 MobiDBLite consensus disorder prediction 471 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05570 Trre-Chr5 56073914 56078557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05570 - - aprc:113866285 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05570 5 56073914 56078557 Trre5g05570 5 56073914 56078557 ECH