Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05558 ATGCAAGAAATTTACACAAAGTCACAAACATATTCAATGGTCGGGTTTGCAAAGGAGAAGCTGAAATATTGGTTACTTGATCACCCATCAATTGTTTCGTTCCGGTGGAGCCCTACGCTATCGTGGGGATCCACGTGGTGGTTTCTCATCTCAGCTATCTTTTTTTACATCGCTGTGGCCGTAACCCTCCATGTCATCCTTAAATTGTGCCGTAGACAGCGTCCTGTACCATTGGGGCCACTTCCCGCAATACATAGTCTTTCAATGTCCTTGATCTCGGTAACAATATTCTTCGGCATGTTTTTCTCGGCCGAAGCTGAGGTTCGAGACACTCGTTGGCTTTGGCAAAGAACCCGAACCACACCGTTCGAATGGTTGCTATGTTTTCCTTTGGGTATTCGTCCATCAGGCCGTGTCTTCTTTTGGTCATACGCTTTTTACCTCTCTCGTTATCTCCACATGTTGAGGACATTCTTTGTCGTTTTGAGTGATAGAAAATTGTCGTTTTTTAGATTATCTAACAACTCGATTATTCTCGTAATGTCATTTTTATGGCTCGAGTTTTCGCAATCGCTTCAAGTGCTGGCTATATTGTTCTCCACGGTGGTTTGTTCCGTGGTTTATGGGTACCGATTTTGGATACAAATCGGGTTACCTAGTAAGACATTCAATGTTTCAGGAAATTTTCATATGATGTTGTTTGGTTGCAATTTGGCTTGCCATGTTGGGGTACTTTTGTTGCATTATTCTAGAGGAGGGTGTAATGGAATTGGAGCTTGGGTATTTAATTCATTTTTGAATGTTCTAATTCTTTGGCACTTCTTGAAGTCATATGTTGATACACATTACCAAAGGAAAGATGCTTCTTCCAAAAAATAA 879 0.413 MQEIYTKSQTYSMVGFAKEKLKYWLLDHPSIVSFRWSPTLSWGSTWWFLISAIFFYIAVAVTLHVILKLCRRQRPVPLGPLPAIHSLSMSLISVTIFFGMFFSAEAEVRDTRWLWQRTRTTPFEWLLCFPLGIRPSGRVFFWSYAFYLSRYLHMLRTFFVVLSDRKLSFFRLSNNSIILVMSFLWLEFSQSLQVLAILFSTVVCSVVYGYRFWIQIGLPSKTFNVSGNFHMMLFGCNLACHVGVLLLHYSRGGCNGIGAWVFNSFLNVLILWHFLKSYVDTHYQRKDASSKK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05558 292 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 24 283 IPR002076 GO:0009922|GO:0016020
Trre5g05558 292 Pfam GNS1/SUR4 family 44 288 IPR002076 GO:0009922|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05558 Trre-Chr5 55995586 55996464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05558 22 289 Acyl Lipid Metabolism Gene Families AT1G75000 58.242 2.17e-106 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05558 - - gmx:100790930 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05558 5 55995586 55996464 Trre5g05558 5 55995586 55996464 ECH