Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05546 ATGGAAACTGTGCCCGATCAAGCCACTACCATATGCACTCACTGTGATCGAGCTGTCCCTGCTGCAAATATTGATCTGCATTCTGTTCATTGCGCTCGGAACCTCGAAAAATGTAAAGTTTGTGGTGATATGGTACCAAAGCAACATGCTGATGATCACTATTTAAACGTCCATGCACCGGTTACCTGTTCATTGTGCAGTGAAACAATGGTGCGTGATATTTTAGATATCCATAAAGGTGAAAATTGCCCTCAAAGGATTGTCACCTGTGAGTTCTGTGAATTTCCATTGCCAGCAATTGATCTGGCAGAGCATCAGGAAGTATGTGGGAATCGAACCGAGATGTGTCACCTTTGTAACAAATATGTTAGACTACGTGAAATAAACAACCATGAAGTTAATTGCAACAGAATCCAAGCCAATGGTGCAGGATCTTCAAGGGATGAAAGGCCAGCTGAAAGAAATGGGAGTGCTCCAAGAAGGCATCAGAATGAATTCCCAAAAGGACGTCTTCTTATCACAGTAGCAATAACTGGTATCGCTGTCATACTCGGTGTCGGATCTATTTTATATCCGAGAAAGGCCGGGACTAGTAATGTTCATTAG 606 0.4274 METVPDQATTICTHCDRAVPAANIDLHSVHCARNLEKCKVCGDMVPKQHADDHYLNVHAPVTCSLCSETMVRDILDIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTEMCHLCNKYVRLREINNHEVNCNRIQANGAGSSRDERPAERNGSAPRRHQNEFPKGRLLITVAITGIAVILGVGSILYPRKAGTSNVH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05546 201 MobiDBLite consensus disorder prediction 141 163 - -
Trre5g05546 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 110 IPR013083 -
Trre5g05546 201 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 6 186 - -
Trre5g05546 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 57 IPR013083 -
Trre5g05546 201 MobiDBLite consensus disorder prediction 147 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05546 Trre-Chr5 55889668 55892163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05546 - - zju:107421365 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05546 5 55889668 55892163 Trre5g05546 5 55889668 55892163 ECH