Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05536 ATGGTGAAAGGCGTTGTCGGAGAAGAAACCCGATTCCAATCGGTCGAGGATCGTCTCACCAAATCTTCCCCTCCAGCAGCTGAGGTAGGTCTACTGATAGGAAAATTCAGCTCCGCATTGGACCGTGTCTTCCTCTTCGATTTGATTCCAACTCCACACAATGATTCCGGCGAACCCGCTTCTTCCATCACTCAACCTGATAAGAAAACCGCTTCCAAATCAAAATCTCAAACCTCCGATTCTTCTTCTCTATTCATCGATAAGGATTGGGTTTCCGAACACGCTCGTCAGGTTTCTAGAATGTTAGTTGGTGGCATTAAGGTTGTTGGTGTCTATGTTTGGGTTAATGATAATGCTTTCAAGAATTCAACCATAATGCTTTGCCAGACTGTTAAGGAAGTTGCTGAAGCAGCTCCGGTTTTGGAGGTTAATTGGGGTGAAAGACTGCTTCTTCAAATTTGTTATGGCCCGAGAAGGTGGAATTGTAGAAACTGCTCACTATCTTCAAATATTACATCTAGTAGTCTTCGCCCGTGTGATTTTAAAATGGGGAAGGTCTTAAGTTCTTTTCAAACTTTTAGGTGTATGCACAACTTTAACCTCAGGTTGCCCATATTGCATGACGGTTCATCCAAATTTCAGACATTGAGTGACGTTCTTCATCATGCAATATCGGTTCATGCCAAAGAGCTTTCAGATGCAAAATCCCTGATCGATGGTAAATTGGTTCTTGATAGTGAACCATGCCCGTCCGATGGTGTGCATGAAGTTGAATTGCTTATACCATTTTCAAATAATAGTTTTATTGAAGCATACAGCCAAAAAGATGTTTCTGGTATTCTTTCTTTTAGTGGCACAATATGTTCATTTGCTTATCTGAATTCAAAAGAGCCAATTTCACAAGCTGTCACTGATATAAAGGGAGATATCATTACAAGCCTGCAAAGTAGATTGGATATAATCTGTGATGAGACGGATGTTGATTCAGGTAACCACCACGATGTTGGAAGGCAAGTAGGTGATGATGATGTATCAGTTGAAAAGCCTGTTTCCCAACTTGTGCTGCATTTATTGAGAAAAGAATGCAACCTTCCTTTTCCTAGAAGAGTTTTTGCACCATGGTTAGCAGGGACATATGTGTGTGATTACTTGCAGCCTTCTGAGACTGTTGAGGTTTTAAAAGATCACTGTATGGAGTTGTTATCCATGAAAGCTCCAACTGAGGTCTCTACAATTTTGGAGCCAGAAAAAGAAGTCATATCTTTCAAAACTAAATCTTTCTGGGATGTAGCAGTGCCCTTTTATTCAGAAGTTCACCTCACGGAGGACAAGATGAAACTTGATAGCAGAGGAGAGAGTTCTAGTGATAAACTCGTGAAGCCAGGTCACATTAGTGTTATAGCTGCTGGTCTCATCCTTCTACTATCCGTCTTAGTCGGTTTTGTGTTATTTGTCCTTAGGGGTTGA 1467 0.411 MVKGVVGEETRFQSVEDRLTKSSPPAAEVGLLIGKFSSALDRVFLFDLIPTPHNDSGEPASSITQPDKKTASKSKSQTSDSSSLFIDKDWVSEHARQVSRMLVGGIKVVGVYVWVNDNAFKNSTIMLCQTVKEVAEAAPVLEVNWGERLLLQICYGPRRWNCRNCSLSSNITSSSLRPCDFKMGKVLSSFQTFRCMHNFNLRLPILHDGSSKFQTLSDVLHHAISVHAKELSDAKSLIDGKLVLDSEPCPSDGVHEVELLIPFSNNSFIEAYSQKDVSGILSFSGTICSFAYLNSKEPISQAVTDIKGDIITSLQSRLDIICDETDVDSGNHHDVGRQVGDDDVSVEKPVSQLVLHLLRKECNLPFPRRVFAPWLAGTYVCDYLQPSETVEVLKDHCMELLSMKAPTEVSTILEPEKEVISFKTKSFWDVAVPFYSEVHLTEDKMKLDSRGESSSDKLVKPGHISVIAAGLILLLSVLVGFVLFVLRG 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05536 488 PANTHER PROTEIN ODR-4 HOMOLOG 1 482 IPR029454 -
Trre5g05536 488 Pfam Odorant response abnormal 4-like 30 410 IPR029454 -
Trre5g05536 488 MobiDBLite consensus disorder prediction 55 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05536 Trre-Chr5 55825711 55829496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05536 - - gmx:100813649 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05536 5 55825711 55829496 Trre5g05536 5 55825711 55829496 ECH