Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05535 ATGGATACTTCCTCAGGTCAAGGATTTATTTACCCGTTGCACCGTCGTAAAACTCTTCACCTGGTTAGACATGCCCAAGGGTTTCACAATGTTGAAGGAGACAAGAACCCTGACTCATACATATCTTACGATCTTTTTGATGCAAGCCTGACTCCTCTTGGCTGGAAGCAGGTTGATAATCTGAGAGAGCATGTTAAGGCAAGCGGTCTTTCCAAAAGAGTTCAACTAGTTATTGTTTCCCCCTTGTTAAGGACCATGCAAACAGCTGTTGGAGTCTTTGGTGGTGATGCACACACTGATGGAATTGATGCCCCTCCTCTGATGAATGACAATGTGGGGAATAGCAATCGTCATGCAATTTCAAGTCTGAATTCGCCACCATTTATAGCAGTAGAGCTTTGCCGAGAGCATTTGGGGGTGCATCCTTGTGATAAGAGAAGAAGCATCACTGAGTACAAAAATATGTTTCCAGCAATTGATTTTTCACTGATAGAGCATGATGAGGACATTTTGTGGAAACCTGATATTAGAGAGGAGAATGAAGAAGTTGCTGCCAGGGGACTGAAATTTTTGGAATGGTTGTGGACACGCAAAGAAAAGGAGATTGCTGTTGTTAGCCACAGTGGTTTTCTATTTCATACTCTAAGTACTTTTGGAAACGATTGTCATCCAAATCTGAAGAATGAAATCTGCACACATTTAGCTAATGGTGAACTGCGTTCAGTGGTTATCATTGATAGGGGGATGATAGGATCAGATGAGCCTTCGACCAACTATCCTGGCAAAATTCCAGATGGCCTTGACCTTCCTAGTGATGTTGCGGACGAGAAACTTTCTGAGAATGGGCCAACAAATTAA 858 0.4266 MDTSSGQGFIYPLHRRKTLHLVRHAQGFHNVEGDKNPDSYISYDLFDASLTPLGWKQVDNLREHVKASGLSKRVQLVIVSPLLRTMQTAVGVFGGDAHTDGIDAPPLMNDNVGNSNRHAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKNMFPAIDFSLIEHDEDILWKPDIREENEEVAARGLKFLEWLWTRKEKEIAVVSHSGFLFHTLSTFGNDCHPNLKNEICTHLANGELRSVVIIDRGMIGSDEPSTNYPGKIPDGLDLPSDVADEKLSENGPTN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05535 285 FunFam Phosphoglycerate mutase-like protein 1 13 260 - -
Trre5g05535 285 MobiDBLite consensus disorder prediction 254 285 - -
Trre5g05535 285 Pfam Histidine phosphatase superfamily (branch 1) 19 90 IPR013078 -
Trre5g05535 285 CDD HP_PGM_like 18 89 IPR013078 -
Trre5g05535 285 SUPERFAMILY Phosphoglycerate mutase-like 17 246 IPR029033 -
Trre5g05535 285 Gene3D - 17 249 IPR029033 -
Trre5g05535 285 SMART PGAM_5 18 214 IPR013078 -
Trre5g05535 285 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 13 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05535 Trre-Chr5 55820631 55824008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05535 - - cam:101489637 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05535 5 55820631 55824008 Trre5g05535 5 55820631 55824008 ECH