Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05524 ATGGCGGCACCTCCAACCAAAGACCAAGTCCTCTCTCTCCTCGCCGCCGCCAATAACCACGGCGACATATCTGTCAAAACCAATTCCTTAAAACAAGCCAAAGACCTTCTTCTCTCCATCGACCCCTCTCTCGCCGCTGACCTTTTCCCTTATCTCCTTGACCTTCAATCTTCTCATGAAAGCCTCGTCCGCAAATTGCTCATACAGATAATTGAGGAGATTGGTTTCAGAGCAGTTGAACATTCTCCTTCATTGATATCTTCACTATTAACATTTTTACGAGACAGTGATGTAACGGTTGTAAAACAGACTATTATTAGTGGCACTAATATATTCTGTAGTTGTTTCGAAGAGTTGATTCTGCAGTTTCAACAATGTGGCAAAGTTGAGAGGTGGTTAGAAGAGATTTGGATGTGGATGCTTAAGTTCAAAGAGGCTGTTTTTGAGATTGCTCTTGAGGGTGGTTCTTCTGGAATAAAGTTGTTGGCACTGAAATTTTTGGAGATTTTTGTATTACTTTTTACATCTGACATCAGTGATCCTGACAAATCAGCCACTGAAGGAGCCCGACAAGCTGTTAATATCTCATGGTTGGTGGGTTCTCACCCTGTTCTTGATCAAATGGTGCTTATGACAGAGGCAAATAGGACAATTGGCATTTTATTAAAATTGTTGCAGTGCTCTGGCAATCTCCCCGGTTGCTTGACAATTACTGTTGTGAATTGTTTAGCGGCCATTGCAAGGAAAAGATCACAACACTATGATTCCATCCTTTCAGCATTGCTTGATTTTGATCCAAATGTTCAAACAGTGAAAGGATGTCATGTTGTCAGTGTTCAGCACTCTTTAAGAACAGCTTTTTTGGGTTTTCTAAGATGCACTTATTCTCCGATAATAGAGTCAAGAGAAAGACTGATAAGGAGCCTGCGAGCTATGAATGCGGGGGATGCTGCTGATCAGGTAATTCGGCAAGTAGACAAAATGATTAAAAGTGGTGATCGCTTTACCCGTGATGCTCGAGTTAGCAAGGATGATCAACCATCAACTCAGTTGCCTATTTCTGGGGAGTTATCTAGGAAAAGACCTGTTCCTCATGATAATGAACAATTGGCCAATGGTCATGATGCCATTGCTAAGAGGATTCGTTCTGGTCCTGACTCTGACTTTACTTTACCTGCTCAAATAAATGATTCAGGCCGGGATCTTAGCTCCGTTAACGGAGTGTCACCTTATGCTCCTGTTCCGGAAAGTGAACTAACTGCTGTGGAGCAAATGATTGCTGTTATTGGTGCTTTGATTGCTGAAGGAGAAAGAGGCGCCAAATCTCTTGAAATACTTATTTCACAGATTCATCCTGATCTGTTGGCTGATATTGTCGTAGCTAATATGAAGCACTTGCCTAAGGCACCTCCACCACTAGCAAGGCTTGAGAAATCATCAGTAACTCGTCAAGTAGCTTCCCAAGACAGTCAATCGCAGGTTATAGCAGCATCCGCTTCAATGAGTTCAGTCCAATCCTTGGCTGCCTCTGCCCAAGCACAATTCCCTTCAACTACGGCCACTTCCACTGCCACCACCTCATCAGCATCTGACACCTCCAACCTCAGTAACCTTCCTGCTGATTCTAAACGTGATCCACGCCGGGATCCTCGTCGCCTGGATCCACGACGTGGAGCGACAACTCCTGGAGGAGCAGCTATCTCAGTTTCAGATGATACTGGTGCCACAATATTAGAATCTGAGGATCCCGTGTCTTTTACTAAACCTGTGTCACATCATGTTGCAAGCACTGAGGACGATACCCAAACAGATTTAACAATCAAAATAAAAAATGAGGATATGATCTCCGAAGGCCCTCCAATTTCAGGACCTGATCGGGTTACTCCCAAAACGGAGGCTCTTGAAAGACCTGTAGATCACCGGGTTATGGAAACAAATGTTTCTTTGGATCCTGGGGTCTCTTCTACCAATTCAATAGAAGAGGATCAGAGTACAGTAAATCTTTTGGATGATACTGAAACAAATGGCACAGATTCATCATCTATTTTAGAGTTTGATCAGTTTTCTCTTGACGTTCAAGTGTCACCCACATCAGAAGAAACCTGTTTGGAGTTGCCGCAGCTTCCACCATATATTCAACTATCCCAAGAACATGAAAGTAAGGTGAAACACATGGCTATTAGCCATATAATAGAGTCATACAAACATTTGCACGGGGCAGCATGTCAGCAGTTTTGTATGCCACTACTTGCTAGACTTGTAGCTCAGATTGATGACGATAATGTGATCACTGGGATGCTGCAAAAACACATTCTGGAAGATCACTGGCGAAAGGGGCACGAACTTGTTCTGCATGTTCTGTACCATCTCCATTCCCTGATGATAATGGATTCAGCTGGAAACTCTTCATCTTCTTCTGTTTTATATGATAACTTTCTCTTGGGAGTGGCCAAAACTCTCTTGGATTCTTTTCCAGCTACAGACAAGTCTTTTAGCAGACTTCTTGGTGAAGTTCCATTTCTGCCTGAATCTGCCTTGAAGGTTTTGGAGGATCTATGCTATGCTGATGTTATTGATCATGATGGAAAAATTATCCGCGACATTGAGCGTGTAACTCAAGGCCTTGGTTCTATCTGGAGTTTAATTTTGGGGCGTCCACAAAATCGTCAAGGCTGCTTAGGAATAGCATTGAAGTGTGCTGTACACCCACAGGATGAGATTCGAGCTAAAGCTATTCGGCTGGTGACAAACAAGCTCTTCCAGCTTAGTTACATTGCAGAAGATGTCGTGAAATTTGCAACAAAAATGCTTCTCTCTGCGGTAGATCATGAAGCTTCAAATGCAGCGCAATCTGGACCTACTGAACAAAGAACGGAGGTCGAAAGTCTTGACATAAGTGGTACTTCACAGGCGTTGGAGTCTGTAAATGACACTACAAGAGTTGCTAAACCAACAACTCAAAGTGTTTCATCTATATCGCTTTCTGAAGCACAACGCCTCATTTCTTTATTTTTTGCTCTATGTACAAAGAAACCCAGTCTTCTACAGATTGTATTTGATGTCTATGGACAAGCCTCAAGAACTGTAAAGCAGGCTTTTCATCGCCACATTCCAAACCTTGTGAGAGCCCTCGGGCAATCGTATTCTGAATTGCTCCATATCATATCTGATCCACCAAAAGGAAGTGAAAATCTTCTGACACTGGTGCTACAAATATTGACTCAAGACACAACTCCATCTTCTGATTTGATATCTACTGTTAAACATTTATATGAAACAAAACTTAGAGATGTCACAATTCTTGTTCCATTATTGTCATCGCTCTCCAAAACAGAGGTTTTACCAATTTTCCCACGACTTGTTGACCTTCCATTGGAAAAGTTTCAAAGGGCACTTGCTCACATACTACAGGGTTCAGCTCATACAGGTCCAGCTTTAACACCTGTAGAGGTGTTGGTTGCAATCCATGGAATTGTTCCTGAGAAAGATGGCCTTGCACTTAAAAAGATTACAGATGCTTGCTCGGCTTGTTTTGAACAACGTACAGTGTTTACTCAGCAGGTTCTGGCCAAGGCATTGAACCAGATGGTTGATCAAACTCCGTTGCCACTGCTTTTCATGAGAACCGTTATTCAGGCAGTTGATGCTTTTCCTGCACTGGTTGATTTTGTTATGGAGATACTCTCAAAACTTGTGACCAGACAGGTGTGGCGGATGCCAAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACGCAGCCACGTTCTTTTCATGTATTGTTGCAGTTGCCACCTCAACAATTGGAAAGTGCGCTCAACAGGCATGCTAATCTCAGAGAGCCCCTTGCTTCTTATGCCAACCAACCAACTGTAAAATCTTCACTTAGTAGATCAACTTTAGCTGTTCTCGGTCTTGCAACTGAAACACATGTACAGCAACATTTACCAACATCATTGCACCATTCTGAGACAAGTACTTCAGTTAGTGGGGCAACTCTGACATGA 4008 0.4271 MAAPPTKDQVLSLLAAANNHGDISVKTNSLKQAKDLLLSIDPSLAADLFPYLLDLQSSHESLVRKLLIQIIEEIGFRAVEHSPSLISSLLTFLRDSDVTVVKQTIISGTNIFCSCFEELILQFQQCGKVERWLEEIWMWMLKFKEAVFEIALEGGSSGIKLLALKFLEIFVLLFTSDISDPDKSATEGARQAVNISWLVGSHPVLDQMVLMTEANRTIGILLKLLQCSGNLPGCLTITVVNCLAAIARKRSQHYDSILSALLDFDPNVQTVKGCHVVSVQHSLRTAFLGFLRCTYSPIIESRERLIRSLRAMNAGDAADQVIRQVDKMIKSGDRFTRDARVSKDDQPSTQLPISGELSRKRPVPHDNEQLANGHDAIAKRIRSGPDSDFTLPAQINDSGRDLSSVNGVSPYAPVPESELTAVEQMIAVIGALIAEGERGAKSLEILISQIHPDLLADIVVANMKHLPKAPPPLARLEKSSVTRQVASQDSQSQVIAASASMSSVQSLAASAQAQFPSTTATSTATTSSASDTSNLSNLPADSKRDPRRDPRRLDPRRGATTPGGAAISVSDDTGATILESEDPVSFTKPVSHHVASTEDDTQTDLTIKIKNEDMISEGPPISGPDRVTPKTEALERPVDHRVMETNVSLDPGVSSTNSIEEDQSTVNLLDDTETNGTDSSSILEFDQFSLDVQVSPTSEETCLELPQLPPYIQLSQEHESKVKHMAISHIIESYKHLHGAACQQFCMPLLARLVAQIDDDNVITGMLQKHILEDHWRKGHELVLHVLYHLHSLMIMDSAGNSSSSSVLYDNFLLGVAKTLLDSFPATDKSFSRLLGEVPFLPESALKVLEDLCYADVIDHDGKIIRDIERVTQGLGSIWSLILGRPQNRQGCLGIALKCAVHPQDEIRAKAIRLVTNKLFQLSYIAEDVVKFATKMLLSAVDHEASNAAQSGPTEQRTEVESLDISGTSQALESVNDTTRVAKPTTQSVSSISLSEAQRLISLFFALCTKKPSLLQIVFDVYGQASRTVKQAFHRHIPNLVRALGQSYSELLHIISDPPKGSENLLTLVLQILTQDTTPSSDLISTVKHLYETKLRDVTILVPLLSSLSKTEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAVDAFPALVDFVMEILSKLVTRQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLESALNRHANLREPLASYANQPTVKSSLSRSTLAVLGLATETHVQQHLPTSLHHSETSTSVSGATLT 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05524 1335 Gene3D - 2 342 IPR011989 -
Trre5g05524 1335 MobiDBLite consensus disorder prediction 514 540 - -
Trre5g05524 1335 SUPERFAMILY ARM repeat 9 922 IPR016024 -
Trre5g05524 1335 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1334 - -
Trre5g05524 1335 Pfam Symplekin/PTA1 N-terminal 97 320 IPR032460 -
Trre5g05524 1335 MobiDBLite consensus disorder prediction 514 569 - -
Trre5g05524 1335 MobiDBLite consensus disorder prediction 338 369 - -
Trre5g05524 1335 MobiDBLite consensus disorder prediction 541 556 - -
Trre5g05524 1335 Pfam Symplekin tight junction protein C terminal 1097 1275 IPR022075 -
Trre5g05524 1335 MobiDBLite consensus disorder prediction 1315 1335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05524 Trre-Chr5 55694305 55712671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05524 K06100 - gmx:100789876 1996.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05524 5 55694305 55712671 Trre5g05524 5 55694305 55712671 ECH