Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05511 ATGGCCGAATTTTCTCTTCCTAAAGACTCTTATTTTCTTGGATTCGACAGTTCAACCCAATCGTTAAAGGCAACGGTTTTGGATTCAAATCTCAATATAATTGCTTCTGAGTTGATTCATTTTGATTCAGACTTACCCCATTACAAAACTCAAGATGGGGTTTACAGAGATCCTTCTAACAATGGTAGAATTGTTTCACCTACATTGATGTGGATTGAAGCTCTTGATCTCATCTTTCAAAAGCTTTCAAAATCAAATTTAGATTTTTCAAAGATTTCAGCTGTTTCTGGTAGTGGACAACAACATGGTAGTGTTTATTGGAAAATTGGTAGTTCTAAAATATTATCATCATTGGATCATAAAAAACCATTGTTGGAACAACTTGAGAATGCTTTTTCCATTAAGGAATCTCCGATTTGGATGGATTGTAGTACAACTGCTGAGTGTAGGGCAATAGAGAATGCTTTTGGTGGTGCTTTGGAGTTGGCTAAAGTGACCGGATCGCGTGCTTATGAAAGATTTACGGGTCCTCAGATTAAGAAAATATTTGATCATCAGCCTGAAATTTATAATAATACCGAGAGAATCTCGCTTGTTAGTTCCTTTATGGCGTCGCTTTTTATCGGTGCTTATGCTGCTATTGATCATTCTGATGGTGCAGGCATGAATTTAATGGACATTAAGGAAAAGGCTTGGTCTAAAGTTGCACTTGAGGCAACTGCCACTGATTTGGAGTCAAAACTCGGAAATTTGGCCCCTGCGTATGGTGTTGCTGGAAATATTGCTTCGTATTTTGTTGAGAGGTATCACTTTAACAAGGATTGCTTGGTTATTCAATGGTCAGGAGACAACCCTAACAGTGTGGCAGGTCTGACTCTAAATATTCCAGGAGATCTCGCCATCAGTCTCGGAACTAGTGACACTGTATTCATGATCACTAAAGATCCTAATCCAGGGTTAGAGGGACATGTCTTTCCTAGTCCAGTTGATGCAGAAGGTTACATGGTAATGTTATGTTACAAAAATGGGTCCCTTACCCGAGAAGATGTGCGGAACCGTTATGCAGAAAAGTCTTGGGATGTTTTCAATAAATTTCTGCAGCAAACACAACCTTTGAATGGTGGAAAGTTAGGTTTCTACTACAAGGAACATGAAATCCTACCTCCTCTTCCAGTTGGTTACCACCGCTACGTTATAGAAAATTTCTCAGGCGCATTGGACGGAATGAAGGAGCAGGAAGTGAATGAGTTTGATCCTCCATCTGAGGTACGCGGAGTAATTGAAGGTCAATTTCTCTCGATGCGAGCTCATGCGGAAAGATTTGGTATGCCTTCTCCTCCAAAGAGAATTATAGCCACTGGCGGAGCTTCAGCCAATAATTGCATCCTCAGCTCAATAGCTTCGATTTTTGGCTGCGATGTTTATACTGTTCAAAGACAAGATTCGGCATCTCTCGGAGCTGCAGTGAGAGCTGCTCATGGCTGGCTGTGCAACAAGAAGGGTGGTTACTTACCAATATCAAATATGTACATGGATAAATTGGAGAAAACCTCTCTAAACTGCAAACTTTCAGCTAGTGCTGGAGATCAAGAGCTGGTTTCCAAATATGCCGCTATCATGAAAAAGAGAACCGAGATAGAGAATCGTCTGGTTCAAAAGTTTGGACGCTGTTGA 1674 0.4062 MAEFSLPKDSYFLGFDSSTQSLKATVLDSNLNIIASELIHFDSDLPHYKTQDGVYRDPSNNGRIVSPTLMWIEALDLIFQKLSKSNLDFSKISAVSGSGQQHGSVYWKIGSSKILSSLDHKKPLLEQLENAFSIKESPIWMDCSTTAECRAIENAFGGALELAKVTGSRAYERFTGPQIKKIFDHQPEIYNNTERISLVSSFMASLFIGAYAAIDHSDGAGMNLMDIKEKAWSKVALEATATDLESKLGNLAPAYGVAGNIASYFVERYHFNKDCLVIQWSGDNPNSVAGLTLNIPGDLAISLGTSDTVFMITKDPNPGLEGHVFPSPVDAEGYMVMLCYKNGSLTREDVRNRYAEKSWDVFNKFLQQTQPLNGGKLGFYYKEHEILPPLPVGYHRYVIENFSGALDGMKEQEVNEFDPPSEVRGVIEGQFLSMRAHAERFGMPSPPKRIIATGGASANNCILSSIASIFGCDVYTVQRQDSASLGAAVRAAHGWLCNKKGGYLPISNMYMDKLEKTSLNCKLSASAGDQELVSKYAAIMKKRTEIENRLVQKFGRC 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05511 557 Gene3D - 13 511 - -
Trre5g05511 557 SUPERFAMILY Actin-like ATPase domain 296 495 IPR043129 -
Trre5g05511 557 FunFam Xylulose kinase 2 13 310 - -
Trre5g05511 557 Pfam FGGY family of carbohydrate kinases, C-terminal domain 299 494 IPR018485 GO:0005975|GO:0016301
Trre5g05511 557 CDD FGGY_D-XK_euk 11 493 IPR042024 GO:0004856|GO:0042732
Trre5g05511 557 SUPERFAMILY Actin-like ATPase domain 11 290 IPR043129 -
Trre5g05511 557 PANTHER SUGAR KINASE 11 510 - -
Trre5g05511 557 Pfam FGGY family of carbohydrate kinases, N-terminal domain 11 287 IPR018484 GO:0005975|GO:0016301
Trre5g05511 557 Gene3D - 292 477 - -
Trre5g05511 557 PIRSF GlpK 9 118 IPR000577 GO:0005975|GO:0016301
Trre5g05511 557 PIRSF GlpK 123 501 IPR000577 GO:0005975|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05511 Trre-Chr5 55574302 55577400 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05511 K00854 - gmx:100778495 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05511 5 55574302 55577400 Trre5g05511 5 55574302 55577400 ECH