Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05503 ATGTCATCGTCGGTGTCAAGCATTTTTGGTTGCGGTGTTGCGATAGCACCAAATTCATTGAGAAACAAAACAATTCGAATTGAAAGGAGAAATGCTTGTGGTGGATTATTGATTGAATGTTCATCGAGGCCACAGAAGAAATCAACTGCACATCACATGAAGACGAGGCCAAGAAAATCAACACCGTCGGATAGGAATCGGAAACCAACTGAGTATGCTCCGTTGCCACTACTACCTCCTGATTTTACAGTTGTTATTCCTGCTGATGCATCTGCGCCTCCTCCACCTCCCACTCCTTCTGCTTAA 306 0.4444 MSSSVSSIFGCGVAIAPNSLRNKTIRIERRNACGGLLIECSSRPQKKSTAHHMKTRPRKSTPSDRNRKPTEYAPLPLLPPDFTVVIPADASAPPPPPTPSA 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05503 101 Pfam Family of unknown function (DUF5323) 32 91 IPR020526 GO:0003735|GO:0005840|GO:0006412|GO:0009507|GO:0019843
Trre5g05503 101 PANTHER 50S RIBOSOMAL PROTEIN 6, CHLOROPLASTIC 4 90 IPR020526 GO:0003735|GO:0005840|GO:0006412|GO:0009507|GO:0019843
Trre5g05503 101 MobiDBLite consensus disorder prediction 41 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05503 Trre-Chr5 55534222 55534527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05503 K19035 - gmx:100805806 101.293