Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05502 ATGGATCCTTGTCCGTTTGTTCGTCTCACCATCGGAAACCTCGCTCTCAAAATTCCGGTTGCATCAAAGCCTGCACGTTCCGTCGTTCATCCATCTTCCTCTCCGTGTTTCTGTAAAATCAAACTCAAGAACTTTCCTCTTCAATCCGCTCTTGTTCCCTTCATTCCTCACGATAATCTCTCCCCTGACTCACAAATTCAACCTATCGCCGCTACTTTTCATCTCAGTAAAGCCGATCTCGACAGACTCGCCGGAAAAAGTATATTCGTCAAGAAACTTTGTTTGAAAATCTCGATCTATACTGGCAGGAGTGGCACAACATGCGGCGTTAATTCCGGGAGACTTCTCGGCAAGGTTTCCGTTCCGTTGAATCTTACCGGAACTCTAACGAAGGCAACGGTGTTTCATAATGGATGGATTACAGTCGGAAAAGATGCCAAAGGAGCTTCTGCACAGTTTCATTTGAATGTAAAAGCAGAACCTGATCCTAGATTTGTTTTTCAGTTCGACGGCGAACCGGAATGTAGTCCTCAAGTTTTTCAGATCCAAGGCAATATTTCACAACCTGTATTCACGTGCAAATTCAGTTTCAGAAACAACAGTGGTGACCGTAATCAACGTTCTAGATCATTGCAATCGGAAGTAGGAAATTCTAGAAGCTGGTTAAGTTCATTCGGAAGTGAACGTGAACGTCCAGGAAAAGAACGAAAGGGATGGTCCATTACGGTTCACGATCTTTCCGGTTCACCAGTTGCAGCTGCTTCAATGGTCACACCTTTCGTTGCATCTCCCGGTTCAGACCGGGTCAGTTGTTCTAATCCCGGTTCATGGCTCATTCTTCGACCTGGAGATGGTACGTGGAAGCCATGGGGGAAACTCGAAGCGTGGCGTGAGCGTGGTGCCTCCGACGGCCTTGGATATCGATTTGAACTTATGCCGGAAACGAACGGTGGAATGAGTGCCGGCGGAATAGTCATTGCGGAATCAACATTAAGCTTGACTAAAGGAGGAAAGTTTGTTCTCGATTTAAGTAGCCGTTGCGGTGGCGGAAATGGTTCTAACGGTCGTGCAACGCCGGGAAGTGCGACTTCACCGGCGTGTAGTCCAAGAGGAAGTGGTGATTATGGTTACGGGCTTTGGCCTTATTGTATGTATAGAGGTTTTGTGATGTCAGCGAGTGTGGAAGGTGAGGGAAGGTGCAGCAAACCTACGGTGGAAGTGAGTGTGCCGCACGTAAATTGCACGGAAGATGCAGCAGCTTTTGTAGCGTTAGCCGCAGCCGTTGATTTAAGCGTCGATGCTTGCAGGCTATTCTCTCAACGGTTAAGAAAAGAGCTTTGCCAACAAATGGATTTACTTGGATGA 1365 0.4725 MDPCPFVRLTIGNLALKIPVASKPARSVVHPSSSPCFCKIKLKNFPLQSALVPFIPHDNLSPDSQIQPIAATFHLSKADLDRLAGKSIFVKKLCLKISIYTGRSGTTCGVNSGRLLGKVSVPLNLTGTLTKATVFHNGWITVGKDAKGASAQFHLNVKAEPDPRFVFQFDGEPECSPQVFQIQGNISQPVFTCKFSFRNNSGDRNQRSRSLQSEVGNSRSWLSSFGSERERPGKERKGWSITVHDLSGSPVAAASMVTPFVASPGSDRVSCSNPGSWLILRPGDGTWKPWGKLEAWRERGASDGLGYRFELMPETNGGMSAGGIVIAESTLSLTKGGKFVLDLSSRCGGGNGSNGRATPGSATSPACSPRGSGDYGYGLWPYCMYRGFVMSASVEGEGRCSKPTVEVSVPHVNCTEDAAAFVALAAAVDLSVDACRLFSQRLRKELCQQMDLLG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05502 454 Pfam Protein of unknown function (DUF1005) 1 447 IPR010410 -
Trre5g05502 454 PANTHER OS08G0163500 PROTEIN 1 449 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05502 Trre-Chr5 55527283 55529045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05502 - - gmx:100805268 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05502 5 55527283 55529045 Trre5g05502 5 55527283 55529045 ECH