Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05500 ATGAAGGCATTGGGATGGTGGTTGATAGTGGTTGGCACACTCCGATTAGCCTCCGTGTGGTTCGGTTTCTTCGACATTTGGGCTCTTCGACTCGCCGTCTTCTCCAACACTACCATGACCGAAGTTCACGGACGCACATTTGGAACATGGACACTATTGACCTGCACCCTGTGCTATATCTGTGCATTCAACCTTGATAATAAGCCTATTTACCTGGCTACTCTATTGTCATTTGTCTATGCGTTTGGCCATTTCTTGACAGAAAACCTAATTTATCACACAATGGCAATTTCGAATCTCACTACTGTGAGCGTATTTGCAGGAACATCGATAGTATGGATGCTATTACAATGGAATACGCACCTCAAAGTCCGCTCGAAGCCTTCTAATAGAAAGCATTAG 402 0.4453 MKALGWWLIVVGTLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGTWTLLTCTLCYICAFNLDNKPIYLATLLSFVYAFGHFLTENLIYHTMAISNLTTVSVFAGTSIVWMLLQWNTHLKVRSKPSNRKH 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05500 133 Pfam Erg28 like protein 4 111 IPR005352 GO:0016020
Trre5g05500 133 PANTHER ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED 2 119 IPR005352 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05500 Trre-Chr5 55506084 55508681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05500 - - mtr:11442486 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05500 5 55506084 55508681 Trre5g05500 5 55506084 55508681 ECH