Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05494 ATGTTCTCAATTGCAGCTATCAATGATACTGACTCTAAATGTCAGTGGGAACCACTAGCTCCCACCAAAGAAGCCCAGGAATTTCATCTTTCTCAAACTTATCATGAAGGACTTGTCAAATTACAAGCAAAAGAATATGAAAAGGCTCGGGAGCTTTTAGAATCTGTCCTTAAAGATCCTCTTATTGCTAATGCTCAGGTCGATAGAGGTGCCGGTGACAGTCATCTATTGCAGCTCAGATTCTTGGCATTGAAAAACCTTGCTGCTGTTTTTCTTCAGCAAGGTTCTACTCATTACGAGAATGCTCTACACTGTTATCTTCAAGCTGTGGAGATTGATTCTAAAGATTCCGTTGTCTGGAACCAGCTGGGAACATTGTCATGTTCAATGGGTTCGTTGAGCATTTCACGTTGGGCGTTTGAGCAAGGCCTCTTGTGCAGCCCTAATAACTGGAATTGCATGGAAAAGCTTTTGGAAGTTCTTATCGCAATTGGTGATGAAGTTGCTTGCCTTTCTGTTGCTGAGTTGATTCTGAGGCACTGGCCGTCACATTCTCGCGCTTTGCATGTTAGAAATACCATTGAAGAATCGGAACCATTGCCATTTGCTCCCAGAGGCATAGACAAATTGGAACCAAAACATGTGCGGCTCAAATTTCCTGACAAGAGAAAAGCTAATAATGAGAATCTAGATGACGATGTTGCATTTAAAAAGCTGAACCAAAACAAAGATCTATACCTCAGCGAAGCTTCCTGGGTGGCTCTTGCTGATGCACTGCTGGAAATCTTATTGCCTTCAAATCTGCAAATTTCTGAGGTAGAACCTAAAAAAACGTGCAATTCTCCGGACATTAAGCTAAGAATAAACTTACCTTGTAGTTCAGAAGCTGCTGTGAACACTGTGGAAGTGAAAGGGTTAAGTGGTGAAGATAGTACTTTTATTGATGGTAATGTAGGACCGGCAAGTGATTTTAAAGACAAAGAAGCAAATACCCAAGAAGAACAACCGCATGAAAGGCGAAGTTCTCGACTTGAAAGGCTCCGCAGTCGTAAACCAGGGAAAGAAGAATCAAGCTTTTGTGGCAAGGATCCTGCCAAGATTGTCATTCGGTATCTAGAACCTTTCATCGCTGGTGGATTGGGTGATCAAGAAGCTATTGATAGTGATACCACAACACTATCCTCAGCAGGAAATTCTGAATATGATAATGTTTCTGCATTTTTAAGACAAACTTCAAATAATTATGGTGCTTACCATTTGGGGCACTTGCTGTTAGAAGAGGTTTCAAGACAAGGCCTTCCATTTCAGGATGCTTTTGTCAAATTTCTGGAGTTGGAAAAGTTGACGAGGCATTGGGGAAAGGATAGAACTGCTGAGTGTAATATTTTTCTTGCTGAGCTGTATTATGATTTTGGGTTATGCTCCCCCACTGGTTCTAAACGACTGGAGTGGATGTCAGAGGCATCTTATCATCTCTGCAAGATTGTAGAGTCTGTAGCTCTTGATTATCCTTTTCACTTGACTACTGCCTTGAATGAAAGTTGCAATTTAATTGATGGTTTCCCAGAGACTAGTGGAACATCAATAAATACCTCCACTGAGAATAATGCAGATTTAGACAGGTCGCTTTTAATGAAGAACAGTTCATTCTGGTCTCGATTTTACTGGTTAAGTGGGAGATTGTCTATTTTTGAAGGCAACAAGGCAAAAGCTTGTGAAGAGTTTTGTATTGCTTTGTCACTTTTGGCAAAAAGGGAAAAATTAGAAAATTCCCCAGGTTCAATTCCCCGTCCACATTGCAAGGATGTAAAAGAAATAAACATTGATAGAGTTCTTTACGAAGTTAATATATTGAAGGATGTCTACTTCAATTCATTTTCTTTATCCATGACAGATAAAAAAGATGAAAAGATAACTTCCATCGAGCTTAGAGCTCTAGATGTTCTAATTGAAGCATGTCAGAAGACAATGCCAATGGATGTAGATCTGTATTTCAATTGTCATTACAGAAAACTGAAAATACTTATGGCATTGATGGGTTTGAGCACAAGTATTACATCATTTAAATCTTCTGATCAAACACTTGGTTTCAGCGGACCTTCAAATTTGGATACTGACTCAAGTGAAAGCTCTAGCAAGCAATGTAGCCACTTGGTTGCTGAGGAAGTGAAGGCACTCTCTGACTGTATATCACAAGTGAAGAAAGTTATTGATCAATGCGGAGATTCCGATGGCCTCACTATTCCAACAAGCAGCCTTTGTCAAATGCAATCTCTGCTGCTGTTAATCATGAGCTATGTCGCGAATGTACTTGTCTGCAACAATACCTCGGCACAAGCAATCTCTGATCAAGTAGAAAGTAGCTGTTTTGTTGACGCAGCTATTGTATTCTGCAAACTCCAGCATCTTAGCCGAACCACACCTATCAAAACTCAAGTTGATTTAATTGTTGCTACGCATGACATGCTTGCTGAATATGGGCTTTGCTGTGTCGGTAAAGGTGGCAAAGGTGGAGAAGGAACATTTCTTAGATTTGCAATAAAGCATCTCTTGGCATTGGATATGAAGTTTAAATCCAGCTCTAACCTTAAAAATAAAGAATCGATGCGATGCGAAGAAGCATCTAATAATAATATTATCAATGTATCTATGGAAGATTCAAGATCAGATACATCAGATTTCCGGATGGATTGGACCAGAATTAATGAAATTACCTCGGTGAAAAAGGAGGTTTCTGAAGAAGTGTCTAAAAGCATTTCATCTTGCAAAGCTCAGAATAAAGACGGTAAGGAAGAAGAGTGTGAAAATCATGTGGGTGCTGGGACTGACTGTGAGTTAGTTAAGGGTGAAAGTTCATGCAATCAATTGATTGCATGTGGAAATGAACTTTCTGAAGATGAAAGGGAAGATCTCGAATCTATAGTTGACAGTGCCTTAGATCAGTGCTTTTTCTGTTTATATGGATTAAACCTAAAGTCAGATTCATCCTATGAAGATGATCTAGTGATGCACAAAAATTCAAGCCGGGGAGATTATCAGACCAAGGAACAGTGTGCTGATGTTTTCAAGTATGTTCTTCCTTATGCAAAGGCATCTTCTAAAACTGGACTGGTCAAGCTTCGCAGAGTTTTAAGAGCTATCAGGAAACACTTTCTTCAGCCACCAGAGGATCTCTTGACAGGAAATCCAATTGATAAGTTCCTAGATGATCCTAATCTATGTGAAGATAAACTATCAGAGGAGGCAGGGTCTGAAGGATTTCTTGAAACTATAACTAAGACCATGTTTCCTGACGTGGGAGGTCTTGGACAGTATAACACAACGCTATTAAGGAGGTCTGAGCCATATTTGGATGTCTACTGTAACTTGTATCATTTCTTGGCTCTGTCTGAGGAAATGAGTGCAACAGATAAATGGCCTGGATTTGTGCTGACCAAGGAAGGGGAAGAATTTGTTGAGCAAAATGCTAAGCTCTTCAAATATGATCTCATGTACAATCCTCTGCGCTTTGATAGCTGGCAGCGACTTGGAAATATTTATGACGAGGAAGTAGATTTGTTACTTAATGATGGTAGCAAGCACATTAATGTAGTAGGATGGAGGAAGAATCCTACTCTATCTGAGAGAGTGGAAACAAGCCGAAGAAGGAGTAGACGGTGCCTACTAATGAGTTTAGCTTTGGCAAAGACATCTGCTCAGCAGTGCGAGATACATGAGTTATTGGCATTGGTATACTATGACAGTCTTCAAAATGTAGTCCCATTTTATGATCAAAGATCTGTTTTGCCCTCAAAGGATGCAGCATGGATGGCGTTCTGTGAGAACTCAATGAAACATTTTAAGAAAGCTTTTGCACTTCAGCAAGATTGGTTGCATGCATTTTACTTGGGTAAACTTAGCGAAAAGCTTGAATATTCACATGAAATTGCATTATCATATTACAATAAAGCTATTGCTTTGAACACATCAGCTGTTGATCCTGTCTATAGGATGCATGCCTCACGCTTGAAACTATTATTTAAGTGCGGAAAACAGAATGTGGAAATTTTGAAGGTGCTTTCAGCAAACTCCTTTGATCAATCTGTGAAAGAAGCTGTCACAAGTATCCTCGGCAGCACTGATACATCTTTAAATACAAAGGAGAGGGTTATTCATACGAATTATGTGGAGACAAAGCATGAAGGGTTATTCAATTTGGATACTGCATGGTCCATGCTTTACAATGATTGCCTTTCTGCACTTGAAACTTGTGTCGAGGGGGAACTCAAGCATTTCCATAAGGCCAGATACATGCTGGCTCAAGGGTTGTATAGAAGGGGTGAAAGTGGTGATATAGAGAGGGCAAACGATCAACTATCTTTCTGCTTCAAATCTTCACGCTCATCATTTACTATAAATATGTGGGAAATTGATAGCATGGCAAAAAAAGGAAGGCGCAAGACGCCGGGTTCTACTGGGAATAAAAAAGGCCTCGAGGTTAACTTACCAGAAAGTTCTCGAAAATTCATTACTTGCATTCGAAAGTATGTGCTGTTTTATCTCAAACTATTGGAGGAGACAGGAGATAGATCCATTCTTGAACGTGCATATGTTTCTCTCCGAGGAGATAAGCGGTTTTCATTATGCATTGAAGATCTTGTACCAGTGGCTATCGGAAAATATTTGAAAGCTCTGATTTCAACTATGCGCCACCCTCAGACTACTGCCTCTCCTCCAATGAGCAGTTCTGACAATGTGTTGGAGAGAATGTTTGCGTTATTTATGGAGCAAGGAAGCTTATGGCCAGAAATATGCAGCTTGCCTGAAATTGAGTGCCCTGATACATCAGAGAGTATTGTTTATGGGTATCTTCACGAACATATAGCATTATTGGAGATAAATGGAAAACTGGAAACTCTTGAAACAATTAATGAGAAGATTCGAAAACGTTTTAAGAATCCTAAGCTCTCAAATAGTTGTTGCGCAAAAGTCCATAATTTGAATGATGATGGGATGGAAAATAGCCAGTTGCGTATTGATTTGCAGCCACGTGAATTATGGATTACAGCTTTTGAAGATCCATCTCATTTAGAAAAGATTGAAACAAAATGGAGTGCCATTTTATCAAAAATAAGGGATATACTGATCAAGAAAGCTTCCGATGAAAATTTGGAAACAGCAAACACTCTGTTCAGAGCTTGCTATCATTTTTACCGGGAGAGTTCTTCTGTGGTGCTTACCTCTGGCCTCAACTTTTATGTAATTCCAGCTCAATTAGTAACAGTGACACCGTTTGACCCGACTATGACTGGAGTTGAAGCCCTTGATCTGAGCATCCCAAGGAAGCTTCTCTTGTGGGCCTATGCACTAGTGCATGGACGTTATGCGAATATATCAGTTGTTGTGAAGCATTGTGAAGAAATTTCAAAGTCAAAGATGAAAAGGGGAAGTGGAATGTCACCTGCGCTTACAAACAGCTCACCTGCGCTTACAAACAACTCACCTGCCACTGTCCCAACTCTTCCTGGTAGCAGTAGAAGTGGACCAAATGACGTTGATTCTGTCCATGTTTCAACAGCAGGGAGTGGTTCACTTTACACCGATTACATTCAGAAGAATCTATTTGGTTCTCCCCAGTTGCATCAATGTACCACCAACGATGCAGAGAGAAGCAATGTGAACGCACGTGAGGGAGAAACACGAGATTGA 5688 0.4014 MFSIAAINDTDSKCQWEPLAPTKEAQEFHLSQTYHEGLVKLQAKEYEKARELLESVLKDPLIANAQVDRGAGDSHLLQLRFLALKNLAAVFLQQGSTHYENALHCYLQAVEIDSKDSVVWNQLGTLSCSMGSLSISRWAFEQGLLCSPNNWNCMEKLLEVLIAIGDEVACLSVAELILRHWPSHSRALHVRNTIEESEPLPFAPRGIDKLEPKHVRLKFPDKRKANNENLDDDVAFKKLNQNKDLYLSEASWVALADALLEILLPSNLQISEVEPKKTCNSPDIKLRINLPCSSEAAVNTVEVKGLSGEDSTFIDGNVGPASDFKDKEANTQEEQPHERRSSRLERLRSRKPGKEESSFCGKDPAKIVIRYLEPFIAGGLGDQEAIDSDTTTLSSAGNSEYDNVSAFLRQTSNNYGAYHLGHLLLEEVSRQGLPFQDAFVKFLELEKLTRHWGKDRTAECNIFLAELYYDFGLCSPTGSKRLEWMSEASYHLCKIVESVALDYPFHLTTALNESCNLIDGFPETSGTSINTSTENNADLDRSLLMKNSSFWSRFYWLSGRLSIFEGNKAKACEEFCIALSLLAKREKLENSPGSIPRPHCKDVKEINIDRVLYEVNILKDVYFNSFSLSMTDKKDEKITSIELRALDVLIEACQKTMPMDVDLYFNCHYRKLKILMALMGLSTSITSFKSSDQTLGFSGPSNLDTDSSESSSKQCSHLVAEEVKALSDCISQVKKVIDQCGDSDGLTIPTSSLCQMQSLLLLIMSYVANVLVCNNTSAQAISDQVESSCFVDAAIVFCKLQHLSRTTPIKTQVDLIVATHDMLAEYGLCCVGKGGKGGEGTFLRFAIKHLLALDMKFKSSSNLKNKESMRCEEASNNNIINVSMEDSRSDTSDFRMDWTRINEITSVKKEVSEEVSKSISSCKAQNKDGKEEECENHVGAGTDCELVKGESSCNQLIACGNELSEDEREDLESIVDSALDQCFFCLYGLNLKSDSSYEDDLVMHKNSSRGDYQTKEQCADVFKYVLPYAKASSKTGLVKLRRVLRAIRKHFLQPPEDLLTGNPIDKFLDDPNLCEDKLSEEAGSEGFLETITKTMFPDVGGLGQYNTTLLRRSEPYLDVYCNLYHFLALSEEMSATDKWPGFVLTKEGEEFVEQNAKLFKYDLMYNPLRFDSWQRLGNIYDEEVDLLLNDGSKHINVVGWRKNPTLSERVETSRRRSRRCLLMSLALAKTSAQQCEIHELLALVYYDSLQNVVPFYDQRSVLPSKDAAWMAFCENSMKHFKKAFALQQDWLHAFYLGKLSEKLEYSHEIALSYYNKAIALNTSAVDPVYRMHASRLKLLFKCGKQNVEILKVLSANSFDQSVKEAVTSILGSTDTSLNTKERVIHTNYVETKHEGLFNLDTAWSMLYNDCLSALETCVEGELKHFHKARYMLAQGLYRRGESGDIERANDQLSFCFKSSRSSFTINMWEIDSMAKKGRRKTPGSTGNKKGLEVNLPESSRKFITCIRKYVLFYLKLLEETGDRSILERAYVSLRGDKRFSLCIEDLVPVAIGKYLKALISTMRHPQTTASPPMSSSDNVLERMFALFMEQGSLWPEICSLPEIECPDTSESIVYGYLHEHIALLEINGKLETLETINEKIRKRFKNPKLSNSCCAKVHNLNDDGMENSQLRIDLQPRELWITAFEDPSHLEKIETKWSAILSKIRDILIKKASDENLETANTLFRACYHFYRESSSVVLTSGLNFYVIPAQLVTVTPFDPTMTGVEALDLSIPRKLLLWAYALVHGRYANISVVVKHCEEISKSKMKRGSGMSPALTNSSPALTNNSPATVPTLPGSSRSGPNDVDSVHVSTAGSGSLYTDYIQKNLFGSPQLHQCTTNDAERSNVNAREGETRD 1895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05494 1895 SUPERFAMILY TPR-like 33 169 IPR011990 GO:0005515
Trre5g05494 1895 MobiDBLite consensus disorder prediction 326 360 - -
Trre5g05494 1895 Gene3D Tetratricopeptide repeat domain 11 194 IPR011990 GO:0005515
Trre5g05494 1895 MobiDBLite consensus disorder prediction 1805 1849 - -
Trre5g05494 1895 MobiDBLite consensus disorder prediction 1811 1849 - -
Trre5g05494 1895 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 13 198 - -
Trre5g05494 1895 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 1 1843 IPR033053 GO:0006325
Trre5g05494 1895 MobiDBLite consensus disorder prediction 1873 1895 - -
Trre5g05494 1895 Coils Coil 961 981 - -
Trre5g05494 1895 MobiDBLite consensus disorder prediction 312 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05494 Trre-Chr5 55448839 55460906 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05494 K17613 - gmx:100783547 2965.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05494 5 55448839 55460906 Trre5g05494 5 55448839 55460906 ECH