Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05462 ATGGGATCAGAGGAATCTCAACCAAAATGGGAAGGTAAAGTCACCATCGATGCAACAAGCATCACTGCACAACAAGTATGGCTAGTTTTACAAGATTTCTGCAACCTACACAAATGGATTCCAATAGAAACATGTTACCAACTTGAAGGTATTCAAAACCAACCTGGTCTTATTCGTTACTGTGCTTCAACAATCAAAGCTTCTGATGATTCTGAGTCAACAATCAAATGGGCAAAAGAGAAACTGTTGAAAATTGATCCAATCAAACGTTGTTTGTCCTATGAAATTGTTGATAACAACATGGGATTTAAGTCTTATGTTGCAACTTTGAAAGTTGTTCCAATCAATGATGATGATGATGAAGGTGCAGGATGTGTGATTGAATGGGGATTTGTTTGTGATCCAATTGAAGGTATGACATTGGAAGGTTTTAATTCTTATATTGAGTATTGTCTTCAGTTCATGGCTAAGAAGATTGAAGTTGAATCATCATGCTGA 498 0.3635 MGSEESQPKWEGKVTIDATSITAQQVWLVLQDFCNLHKWIPIETCYQLEGIQNQPGLIRYCASTIKASDDSESTIKWAKEKLLKIDPIKRCLSYEIVDNNMGFKSYVATLKVVPINDDDDEGAGCVIEWGFVCDPIEGMTLEGFNSYIEYCLQFMAKKIEVESSC 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05462 165 CDD PYR_PYL_RCAR_like 14 160 - -
Trre5g05462 165 Pfam Polyketide cyclase / dehydrase and lipid transport 14 158 IPR019587 -
Trre5g05462 165 SUPERFAMILY Bet v1-like 9 160 - -
Trre5g05462 165 PANTHER LACHRYMATORY-FACTOR SYNTHASE 4 161 - -
Trre5g05462 165 Gene3D - 3 164 IPR023393 -
Trre5g05462 165 FunFam Lachrymatory-factor synthase 3 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05462 Trre-Chr5 55279412 55279909 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05462 - - gmx:100798368 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05462 5 55279412 55279909 Trre5g05462 5 55279412 55279909 ECH