Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05452 ATGTTCTCCGACGTCAAATCCAGACAACAACAGCAACAACAAAAACAGAAGGGAGGAGAATGGTTATCAGGAAGTTTCAAGCCAGAGAATTTCATTCCAGGTCTTATCATAGGTTTCATTTGTGGCTTCTTGATTGATTTATCAAAGCCAACTACAAATCACTTATCCAACAAAATTTTATCTTCTTCCAAGCTTCAACACCAACTCTCAGTCTCAAGTAATGCTGATCAAGACCTTAAAATGGTTCTGGTTGTTAGGCAAGACCTAAAGATGAGAACCGGAAAGATTGCGTCTCAATGTGCTCATGCTGCCACGGGCATGTATGCTGAATTAACGCGAAGTGACCGGTCTCTTTTAAGACGATGGGAACAGTGCGGCCAGCCCAAAATTGTTGTGAGTTGCAAGAACCAACAAGAAATGAATAAGCTTAAGGAAACAGCTGAGAGTATTGGTCTCCCTACTTTTGTTGTTGCCGATGCTGGACGAACACAGGTTTCTGCAGGATCAAAGACTGTTCTTGCTATTGGACCTGGGCCAAAAGCAATTCTCGATTCGGTGACTGGAAGGTTGGCTCTGCTATGA 582 0.4296 MFSDVKSRQQQQQQKQKGGEWLSGSFKPENFIPGLIIGFICGFLIDLSKPTTNHLSNKILSSSKLQHQLSVSSNADQDLKMVLVVRQDLKMRTGKIASQCAHAATGMYAELTRSDRSLLRRWEQCGQPKIVVSCKNQQEMNKLKETAESIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKAILDSVTGRLALL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05452 193 Gene3D Bit1 74 193 IPR023476 -
Trre5g05452 193 SUPERFAMILY Peptidyl-tRNA hydrolase II 78 193 IPR023476 -
Trre5g05452 193 MobiDBLite consensus disorder prediction 1 20 - -
Trre5g05452 193 MobiDBLite consensus disorder prediction 1 22 - -
Trre5g05452 193 NCBIfam aminoacyl-tRNA hydrolase 79 193 IPR002833 GO:0004045
Trre5g05452 193 CDD PTH2 80 193 IPR002833 GO:0004045
Trre5g05452 193 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 77 193 - -
Trre5g05452 193 PANTHER PEPTIDYL-TRNA HYDROLASE 2 10 193 IPR002833 GO:0004045
Trre5g05452 193 Pfam Peptidyl-tRNA hydrolase PTH2 79 193 IPR002833 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05452 Trre-Chr5 55179368 55181325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05452 K04794 - gmx:100527852 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05452 5 55179368 55181325 Trre5g05452 5 55179368 55181325 ECH