Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05447 ATGAAAGCGTTGCGAGTTGCACTTCATCTTCACGCTTCGTCAACTCGCGTTTTCTCCACGCGCCTTCATTCTTCATCACTCTTTCTTCAAAGGACTAATATCTATATTTCACCGTCGTTGTTGGATGCAAATGTAAGCTTTATCAATACTAATTATGATAACAACCGTCGATTTAGAAGAACGATATGGACTTCTACTCCTGTTTGTATGGGCAGACGTTCCTGCAAAATCGCTGGTCGAAAGGAAGCCCAAAATGCAAAGAAGATGAAACTATACAGTAGGATCGGAAAGGAAGTTGTGTCTGCTGTTAAAAAAGGTGGACCAAATGCATCAACAAATTCAGCCTTGGCTGCTGTACTTGAGAAAGTAAAGGAGCTTGATGTGCCTAGAGATATTGTTGAGCGCAACATCAAGAAAGCAACTGAAAAGGGACAAGAGGCTTATATCGAGAAAATTTATGAGGTTTATGGTTATGGAGGAGTTAGTATGGTAGTTGAGGTATCAACTGATAAGATAAATCGTTCTGTGGCAAAGATTAGAGAAGTGCTAAACAACTGTGGAGGAAAAATGGCAGATTCTGGGTCTGTGCTGTTTAAATTTAGACGTGCTCGGGTAGTAAATATTAAAGTCAGTAATACTGATAAAGATCAGCTGCTTGGCATTGCCTTGGATGCTGGAGCCGAGGATGTAATTGAACCTCCAACATATGAAGATGATACTGAAGAGGATAGGTCAGAAAGGTATTATAAAATTGTTGGTTCTTCAGAGAACTATTCTTCTATACTATCAAAGTTGCGAGAGGAGGGCATAGACTTTGAGTCTGATAATGGTTCTGAGCTTCTTCCAAATACCACAATTGAGGTAGATGATGAGGCTATGGACTTGAACAAGGAACTTATGAGCAAATTACTTGAGCTTGATGATGTTGATGCTGTTTATACAGACCAGAAATAG 954 0.3973 MKALRVALHLHASSTRVFSTRLHSSSLFLQRTNIYISPSLLDANVSFINTNYDNNRRFRRTIWTSTPVCMGRRSCKIAGRKEAQNAKKMKLYSRIGKEVVSAVKKGGPNASTNSALAAVLEKVKELDVPRDIVERNIKKATEKGQEAYIEKIYEVYGYGGVSMVVEVSTDKINRSVAKIREVLNNCGGKMADSGSVLFKFRRARVVNIKVSNTDKDQLLGIALDAGAEDVIEPPTYEDDTEEDRSERYYKIVGSSENYSSILSKLREEGIDFESDNGSELLPNTTIEVDDEAMDLNKELMSKLLELDDVDAVYTDQK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05447 317 FunFam Putative transcriptional regulatory protein 199 284 - -
Trre5g05447 317 PANTHER UNCHARACTERIZED 54 317 IPR002876 -
Trre5g05447 317 Pfam Transcriptional regulator 75 315 IPR002876 -
Trre5g05447 317 Gene3D - 86 146 IPR017856 -
Trre5g05447 317 Hamap Probable transcriptional regulatory protein YebC [yebC]. 70 317 IPR002876 -
Trre5g05447 317 Gene3D - 151 314 IPR026564 -
Trre5g05447 317 Gene3D - 199 284 IPR026564 -
Trre5g05447 317 SUPERFAMILY YebC-like 70 316 IPR029072 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05447 Trre-Chr5 55154249 55160202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05447 - - psat:127084461 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05447 5 55154249 55160202 Trre5g05447 5 55154249 55160202 ECH