Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05439 ATGGATCAAGGATTTTTCAGATTTCTATGTCAAGCAGAAACAAGAAGATTAGTTTCATTGTTAGGAATAACAGTAGCTTTAATTTTAGTACTTCAGTTTTCTGAACTTCCAAATAGTAAGTTTTTTTCTTCTCTTACTGCAAGAATCAAAAGTTTCACAATAGATTCATCTTTGGTTAATTCTACAATTGAGGGTAATAATGTAAATGTTAACCTAAATGCTTCAAATTCAAGATCCAATAATACATTACAAGATATACCAATTAGTCCTCAAGCCTCTTCATTAGATCAAGTTACAAATTCAAATTCAGTGAGTAGTGTTGATGGAAAAGATGTTAATTTAACATCACAAGTGAATCAATCTTCCTTGCTTGCACCACAGCCTATGGTGCCATTGTCCAACGGAACATTCTTCGATTCAAAAATGTATCCGAAGGACGGAATTTTGGAATCTTTGGAACAAATCAATTTAACAATGAGTAAAGATAAGACTAAGATTTCGAAGAATTCTAAGAGGCCATCTAAAGTAGTTCCTATATCTGAGATGAACTTGATGTTGCAGCGCAGCCACGCGTATTCCCAGATAGCAAAACCAGCAAGTTCTGAAGCTGTTAGTGCGGAAATATTGCGTGCAAAATCGGAGATTGAAAATGCCCCTATCGTTGTGGATGATTCAAGACTTTACTCGCCTTTATACAGGAATGTTTCCATGTTTAGAAGGAGTTATGAACTAATGGAGAAAATGCTAAAAGTTTACATCTATCCGGACGGAGACAAGCCAATCTTTCATGAACCATTACTTGATGGAATATATGCATCAGAAGGATGGTTTGTGAAATTAATGGAAGGAAACAAACAATTTACGACTGAAGACCCGGAAAAGGCTCTCTTGTTTTACATACCTTTCAGTTCAAGATTGTTGCAGTTAACTCTTTATGTACGTAATTCGCACAAACGTTCGAACTTAATTGACTACATGAAAAATTATGTCGACATGATTGCCAGAAAGTACCCTTTCTGGAATAGAACAAATGGAACAGATCACTTTGTTGTTGCCTGCCATGATTGGGCCCCTGCAGAAACAAGAGGAAGAATGCTAAATTGCATCAGAGCCCTATGCAATGCTGACATTGAAGTTGGATTCAAGATAGGAAAAGATGTATCACTTCCGGAAACATATGTAAGATCCATTGAAAATCCTATCAAAAATATAGGTGGCAACCCTCCTTCTCAGAGGCCTATCCTAGCATTTTTCGCAGGCGGTTTGCACGGTTACGTTCGGCCTATGCTGTTGAAGTTGTGGGAGAACAAAGAACCTGACATGAAAATATCCGGTCCGTTACCGCATGTGAAGGGTAACAGAAACTACATCGAACTCATGAAGAGTAGCAAATTCTGCATTTGTGCAAGAGGTCATGAAGTTAATAGTCCGCGCGTGGTTGAGGCCATATTCCACGAGTGCATTCCTGTTATCATATCTGATAATTTTATTCCTCCTTTGTTTGAGGTTTTGAATTGGGATTCTTTTGCTGTGTTTATCAAAGAGAAACATATTGCTTATTTGAGGGATATACTACTTGCTATATCAGAAGAGAAATACTTGGAGATGCAAAAGAGAGTGAAAAAGGTGCAAGAGCATTTTCTTTGGCATCATGAGCCTGTTAAGTATGATTTGTTTCACATGCTTCTTCATTCAATTTGGTATAATAGACTTTTCTATACAAGCTAG 1728 0.3709 MDQGFFRFLCQAETRRLVSLLGITVALILVLQFSELPNSKFFSSLTARIKSFTIDSSLVNSTIEGNNVNVNLNASNSRSNNTLQDIPISPQASSLDQVTNSNSVSSVDGKDVNLTSQVNQSSLLAPQPMVPLSNGTFFDSKMYPKDGILESLEQINLTMSKDKTKISKNSKRPSKVVPISEMNLMLQRSHAYSQIAKPASSEAVSAEILRAKSEIENAPIVVDDSRLYSPLYRNVSMFRRSYELMEKMLKVYIYPDGDKPIFHEPLLDGIYASEGWFVKLMEGNKQFTTEDPEKALLFYIPFSSRLLQLTLYVRNSHKRSNLIDYMKNYVDMIARKYPFWNRTNGTDHFVVACHDWAPAETRGRMLNCIRALCNADIEVGFKIGKDVSLPETYVRSIENPIKNIGGNPPSQRPILAFFAGGLHGYVRPMLLKLWENKEPDMKISGPLPHVKGNRNYIELMKSSKFCICARGHEVNSPRVVEAIFHECIPVIISDNFIPPLFEVLNWDSFAVFIKEKHIAYLRDILLAISEEKYLEMQKRVKKVQEHFLWHHEPVKYDLFHMLLHSIWYNRLFYTS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05439 575 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 9 566 IPR004263 GO:0006486|GO:0016757
Trre5g05439 575 Pfam Exostosin family 246 525 IPR040911 -
Trre5g05439 575 Coils Coil 526 546 - -
Trre5g05439 575 MobiDBLite consensus disorder prediction 81 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05439 Trre-Chr5 55009168 55011790 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05439 - - psat:127085356 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05439 5 55009168 55011790 Trre5g05439 5 55009168 55011790 ECH