Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05428 ATGTCAGTGAACTCCGGAACCTCTGTCTCTAAATGCTCAGTTCATCAGCTCGAGAATATTGATGAGAATGTTCCTGCATTATCTTGCGCACAGCCTGAAACACCAACAGAATCTATGGAGTTCCTTGCTAGATCTTGGAGTCTTTCTGCCACGGAACTCTCCAAAGCACTGCATAGCACCAATACTACGACATCCACGGCCATTGAGATGCAACTCTTATGCTCTTCTGATCAGTTTTATACCAAAGGTTTCACTTCCTCTAAGGATTCTTTATCAAACGAGCATTGTCCTCAGGTTTTGCCAAAAGAAAGTGGCGAAACAAAGGATTTATTTCTACTTCATCAAGCACTTTCTCCAGAATTCCTGTCCAGTCAAAACTTGCTGAGAACTGGGCTTTACAGGAGCTTGATAAGAGGAAGGAGAACAGGTAGGTGGTTGAAAGATCAGAAGGAGAGGAAAAAGCAGGAAATTAGGACTCATAATGCTCAGTTGCACGCCGCAGTATCGGTAGTTGGTGTTGCTGCCGCTGTTGCAGCCATAGTATCATATGAAAAGCCTAATGTCTACCAAAATAACCCTACCATGGCTTCTGCTGCAATTGCATCTGCAGCAGCTCTAGTAGCCTCTCACTGCATTGAGATTGCAGAAGATATGGGAGCTGAACAGGATCAAATCATAACAGCAGTTGACTCTGCTATTAATGCAAAAACTAATGGAGATATTATGACTCTAACAGCTGGAGCAGCCACAGCACTGCGTGGAGCTGCTACTTTAAAGGCGCGGCTGCAGAAGGGGTTTGGAGCTACTACAATTCCTCCAATTGAGGAGAATTGCGGTGAAGCCAAAGGAACAAACATTTTGAAAGCATTGGACTATGTCTTTAGAGGTGGAGTACTTCTCAAACGTACAAGAAAAGGAGTTCTTCATTGGAAGCAAGTCTCTTTCAATGTTAATTCAAATTTGCAGGTAGTATCCAAAATGAAAAGCAAGCATATTGGAGGAACATTTACGAAAAAGAAGAAATATATAGTCACCGGAGTGTGCAGCGATATCCCTGCTTGGCCGGGAAGGGAGAAGGAAGACATTGGCGAACAAAGAGCATATTTTGGAATAAATACAGAAGACAGATTAATAGAATTTGAATGTGGAAGTAAAGGAGACAAACTGTTCTGGTTAGAGGGAATCCAGTACATGTTGAATTGCAGTGCCAAAGTAACATACTAA 1224 0.4248 MSVNSGTSVSKCSVHQLENIDENVPALSCAQPETPTESMEFLARSWSLSATELSKALHSTNTTTSTAIEMQLLCSSDQFYTKGFTSSKDSLSNEHCPQVLPKESGETKDLFLLHQALSPEFLSSQNLLRTGLYRSLIRGRRTGRWLKDQKERKKQEIRTHNAQLHAAVSVVGVAAAVAAIVSYEKPNVYQNNPTMASAAIASAAALVASHCIEIAEDMGAEQDQIITAVDSAINAKTNGDIMTLTAGAATALRGAATLKARLQKGFGATTIPPIEENCGEAKGTNILKALDYVFRGGVLLKRTRKGVLHWKQVSFNVNSNLQVVSKMKSKHIGGTFTKKKKYIVTGVCSDIPAWPGREKEDIGEQRAYFGINTEDRLIEFECGSKGDKLFWLEGIQYMLNCSAKVTY 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05428 407 Pfam Plant pleckstrin homology-like region 299 402 IPR013666 -
Trre5g05428 407 PANTHER EXPRESSED PROTEIN 25 403 IPR040269 -
Trre5g05428 407 SUPERFAMILY PH domain-like 293 400 - -
Trre5g05428 407 Pfam Auxin canalisation 32 276 IPR008546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05428 Trre-Chr5 54956089 54958384 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05428 - - psat:127084614 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05428 5 54956089 54958384 Trre5g05428 5 54956089 54958384 ECH