Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05422 ATGGCTGGGAGAATAGTCTTGTTCACATTTCTTGCAGCATTTATATGGTTTAATACCCAAAATACATTCGTGAGTTGTGCCTTAACACCAAAGTTACTAAGGAAAATTGCTAAAATCAACCATGAGGGTCCTTATTTGGGTTTAATCATACCAAATGATTTTGAACTTAACCCCCTTCTTAAAAATCCAGGCTATACTCCTAGTGACAACATCATAGATTTTGCAGGAAGGAGATTTCGTTTTGGATCCATTGGTGACAAACCAGTTATATTGGTCATGACCGGATTGAGTGTGATAAATGCAGCTATAACAACACAGCTTCTGTTAAGCTTTTTCGATGTAGATGGTGTGGTTCATTATGGCATTGCTGGAAATGCAAACCCATCTTTGCATATTGGAGATGTTGCTATTCCTCATTATTGGGCTCATTTGGCACTTTGGAGCTGGCAGAGATATGGTCAAGGGGCTGATGATACGTTACCATTAGAGAACAATGGAGACTACACAAGAGAAGTAGGGTTCATAAAATTTTCAGATTTCACTTCAAACATAAGTGCTGCTGACAGTGTTACAGTTGATAACCATCTCAACAATCTTTGGTACCAACCAGAAGAGATTTTTCCAGTTGATGGCATTCCTGAACAAAGACAACATGCTCTTTGGGTCCCTGTTGATTCCAAGTACTACCTTATTGCCAAAAAACTTGAGAACTTGAAGCTAGATGCGTGCATAGACTCAGACACATGTTTGACAACAACACCAAAGGTTGTACTTGTGGACAGAGGAACAAGTGCAGGATTCTACCTAGACAATGCAGCATACAGAACTTTCATCTACAATAAATTTAATGTGAGTCCAGTTGACATGGAAAGTGCATCAGTGGCTCTTATATGCTTGCAACAAAGGATTCCCTTCATTGCTATTAGGGCTCTCTCTGATTTGGCTGGTGGCGGCACTGCTGAGTCGAACGAAGCTGATACATTCTCTCCGCTCGCCGCCACCAACTCTGTTGCCGTTGTAATTGAGTTTGTGAAACTCTTGTCAACCCACCACTCCAAGTTGTGA 1065 0.4094 MAGRIVLFTFLAAFIWFNTQNTFVSCALTPKLLRKIAKINHEGPYLGLIIPNDFELNPLLKNPGYTPSDNIIDFAGRRFRFGSIGDKPVILVMTGLSVINAAITTQLLLSFFDVDGVVHYGIAGNANPSLHIGDVAIPHYWAHLALWSWQRYGQGADDTLPLENNGDYTREVGFIKFSDFTSNISAADSVTVDNHLNNLWYQPEEIFPVDGIPEQRQHALWVPVDSKYYLIAKKLENLKLDACIDSDTCLTTTPKVVLVDRGTSAGFYLDNAAYRTFIYNKFNVSPVDMESASVALICLQQRIPFIAIRALSDLAGGGTAESNEADTFSPLAATNSVAVVIEFVKLLSTHHSKL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05422 354 CDD MTAN 46 343 - -
Trre5g05422 354 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Trre5g05422 354 Gene3D Nucleoside phosphorylase domain 46 346 IPR035994 GO:0003824|GO:0009116
Trre5g05422 354 PANTHER PURINE NUCLEOSIDE PHOSPHORYLASE 9 352 - -
Trre5g05422 354 SUPERFAMILY Purine and uridine phosphorylases 36 350 IPR035994 GO:0003824|GO:0009116
Trre5g05422 354 Pfam Phosphorylase superfamily 46 344 IPR000845 GO:0003824|GO:0009116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05422 Trre-Chr5 54921447 54926799 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05422 - - gsj:114415138 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05422 5 54921447 54926799 Trre5g05422 5 54921447 54926799 ECH