Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05421 ATGGAAACCAACCTATTATTTGATCCTCCTACTCTTTCTCTTCACTTTCCCTCCGTTTCTTCATCCACTGCAAATTTCACACGCACATTCTTCCCCTTTCCTCTTCGTAATAATCACCACCATTCTCTCAAACTACTCGCTCACAATTCACACACCGATCCTATTCAAGATAAACAACAATCTCAATCTTCAAAACCTATTTACTCTCCTACACCCCCCAATCGACAACTTCGAACCCCTCACAGCGGGTATCACTTTGATGGAACTGCTCGGAAATTCTTTGAGGGTTGGTACTTCAAAGTTTCCATTCCTGAGAGGAGGCAAAGCTTTTGCTTTATGTATTCCGTTGAGAATCCTGCTTTTCCCAAGCAATTGACGACGTTCGAATTGGCGCAATATGGACCTAGGTTTACTGGTGTTGGAGCTCAAATTCTTGGTGCTGATGATAAATACATTTGCCAATACACTCCCGAATCAAACAACTTTTGGGGAAGTAGGAGTGAACTGATGTTGGGTAACACTTTTGCGGCTAAACAAAATTCTAAACCTCCAACCAAGGAGATTCCTCCTAAGGAATTTAATGATAGAGTGTTGGAAGGTTTTCAAGTCACTCCCCTTTGGCATCAAGGTTTCATTTGCGATGATGGAAGGTCGAATTACGTAGATACAGTAAAAACGGCTCGCTGGGAGTATTGTACACGTCCTGTATATGGTTGGGGTGATGTTGGGTCCACTCAGAAGTCAACTGCTGGCTGGCTTGCGGCTTTTCCTGTTTTTGAACCACATTGGCAAATATGCATGGGCGGTGGACTGTCAACAGGTTGGATAGAGTGGGATGGCGAGAGGATTGAGTTTGAAAATGCCCCATCTTATTCAGAAAAGAACTGGGGTGGAGCATTCCCGAGAAAATGGTTTTGGGCTCAATGTAATGTTTTTGAAGGTGCTAGTGGAGAAATTGCACTTACAGCGGCTGGTGGATTGAGACAAATACCTGGATTAACTGAGACATTTGAAAATGCTGCATTGATTGGAATTCATTATGGTGGAAAATTTTATGAATTTGTGCCATGGAATGGTGTTGTAAGCTGGGAAGTTGCTACATGGGGTTATTGGTTTATGTCTGCAGACAATGGCAATTATGTGGTTGAATTAGAAGCAACAACAGACGATCCAGGTACTACATTGCGTGCTCCAACCTCAGAAGCCGGCCTTTCTCAAGCTTGTAAAGATACATGCTTTGGAATTCTAAAATTAAAATTGTGGGAACGAAGATATGATGGTAGCAAGGGAAAGATCATATTGGACGTGACAAGTGACATGGCAGCTCTAGAAGTTGGAGGAGGTCCATGGTTTAACACTTGGAAGGGCAAAACATCAACTCCACCTGTTCTTAGCCGTGCTATTGGATTACCTGTAGATGTAGATGGCATCTATAATTTGTTTCCTTTGTTTAAACCACCAGGCTTGTAG 1470 0.4272 METNLLFDPPTLSLHFPSVSSSTANFTRTFFPFPLRNNHHHSLKLLAHNSHTDPIQDKQQSQSSKPIYSPTPPNRQLRTPHSGYHFDGTARKFFEGWYFKVSIPERRQSFCFMYSVENPAFPKQLTTFELAQYGPRFTGVGAQILGADDKYICQYTPESNNFWGSRSELMLGNTFAAKQNSKPPTKEIPPKEFNDRVLEGFQVTPLWHQGFICDDGRSNYVDTVKTARWEYCTRPVYGWGDVGSTQKSTAGWLAAFPVFEPHWQICMGGGLSTGWIEWDGERIEFENAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEIALTAAGGLRQIPGLTETFENAALIGIHYGGKFYEFVPWNGVVSWEVATWGYWFMSADNGNYVVELEATTDDPGTTLRAPTSEAGLSQACKDTCFGILKLKLWERRYDGSKGKIILDVTSDMAALEVGGGPWFNTWKGKTSTPPVLSRAIGLPVDVDGIYNLFPLFKPPGL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05421 489 PANTHER - 55 489 IPR025893 GO:0009976
Trre5g05421 489 MobiDBLite consensus disorder prediction 53 82 - -
Trre5g05421 489 Pfam Tocopherol cyclase 91 447 IPR025893 GO:0009976
Trre5g05421 489 MobiDBLite consensus disorder prediction 53 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05421 Trre-Chr5 54908212 54912658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05421 K09834 - gmx:100809310 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05421 5 54908212 54912658 Trre5g05421 5 54908212 54912658 ECH