Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05420 ATGGCATCTATTAGACGAACCTTGTCTCCGGTTGCTCGAGCCGGAAATGTATCAAATGTTGAAGGCTTTTCAGTAGCTTCCCCTTTGTCTAAATCTTCATCAAGTCCTCAGCACTCTTTGTCGTCATCCGATGGATTGTTACCTTCTTCGGTCACCTCATTGGACTCCCGTGCTTTTTTGCTTGGTGTTTTCTACCCAAGATCTTTGAGGGCTATTGAAAGATCAAATTTAAAGCTCAAGGGACAGCTTTGGAGGAAAGTGCTTTTCCATTTTTTCATTTGTTTCATGGTTGGTGTTTCTATTGGACTCATTCCGCTCGCATCAACTAGCTTGTCATTGAATCTCATGTCAAAAGACTCACGACATCAAGATTTCTCTTTTGAGATAATATCTAGAGTTGGAAATTTGCGTTCGCTTGAAAATTTGAAGACAAATGAGACACCATTAGTTGATGAGGATGTGAAATTTGATGCTACTTTGATTTCTGAAGTGCAAGAACAGGAACTAACAAATGGTGTAGCATATAATGCCTCGGATAGCCAATTTGGTGAAGATCTATATTTGGATTCTCAAAAGCTTCTCATAATTGTCACGCCGACTTACAATCGTCTATTTCAAGCTTATTACTTGCATCACTTGTCACAAACTTTGAAATTGGTCTCATCTCCTTTGTTGTGGATTGTTATTGAGATGAATTCTCAATCTGATGAAACTTCTGATATCTTGAGGAGTAGTGGGATTATGTATAGGCATCTCGTCTGCAAAATGAATCTAACAAACACAAGCCACAGGAGCATTCTTATGAGAAATGTTGCAATAGCTCACATTGAAACTCACCGCCTCAATGGAATTGTGTATTTTGCAGACGATGATAACATCTACTCGGTAGAACTCTTTCAGCAAATGAGAGATATAAGGCGATTTGGAACATGGACTGTTGCAAGACTATCAGAGGATAGAAGCGGCATTGTCTTGCAAGGGCCCATTTGTGATGGAAGTCAAGTGATTGGATGGCACACAAATAATGAATCAGATGGGAAATCTAAAAGATTTCACGCTGAAATGCCTGGTTTCGCCTTCAATAGCACGATACTTTGGGATCGAAAGAAGTGGCACCGACCCAATCCTGAACCTATCAGACAGCTCGAATCAGTCAAGGAAAATTTGTGGGTTAGCACGTTGATTGAGCAGATTGTTGAAGATGAAGGTGAAATGGAAGGTTTAATGAACGACTGCTCGAGAGTTATGGTTTGGCATATTGATCTTGAGTTTTCTTATTCTTCCTATCCTCAGAAATGGATTACGGAGAACAACCTAGATGCCATTTGGAATCTTCCACTTGCGTGA 1347 0.4009 MASIRRTLSPVARAGNVSNVEGFSVASPLSKSSSSPQHSLSSSDGLLPSSVTSLDSRAFLLGVFYPRSLRAIERSNLKLKGQLWRKVLFHFFICFMVGVSIGLIPLASTSLSLNLMSKDSRHQDFSFEIISRVGNLRSLENLKTNETPLVDEDVKFDATLISEVQEQELTNGVAYNASDSQFGEDLYLDSQKLLIIVTPTYNRLFQAYYLHHLSQTLKLVSSPLLWIVIEMNSQSDETSDILRSSGIMYRHLVCKMNLTNTSHRSILMRNVAIAHIETHRLNGIVYFADDDNIYSVELFQQMRDIRRFGTWTVARLSEDRSGIVLQGPICDGSQVIGWHTNNESDGKSKRFHAEMPGFAFNSTILWDRKKWHRPNPEPIRQLESVKENLWVSTLIEQIVEDEGEMEGLMNDCSRVMVWHIDLEFSYSSYPQKWITENNLDAIWNLPLA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05420 448 SUPERFAMILY Nucleotide-diphospho-sugar transferases 193 439 IPR029044 -
Trre5g05420 448 CDD GlcAT-I 192 423 IPR005027 GO:0015018|GO:0016020
Trre5g05420 448 Pfam Glycosyltransferase family 43 213 423 IPR005027 GO:0015018|GO:0016020
Trre5g05420 448 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 193 440 IPR029044 -
Trre5g05420 448 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 82 440 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05420 Trre-Chr5 54904520 54906222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05420 1 442 Glycosyltransferase AT1G27600 43.596 1.77e-118 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05420 K20869 - gmx:100808765 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05420 5 54904520 54906222 Trre5g05420 5 54904520 54906222 ECH