Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05419 ATGGCCATGGCGATTAGGGTTTTTCTCTCCTTTCTACTTTTCCTCTCGCTAACCAATCTTGCTTCTTCGCTCTATGAAGATCAAGTTGGCCTTATGGATTGGCACCAACAGTATATTGGGAAGGTAAAGCATGCTGTGTTCCATACTCAAAAGACTGGGCGAAAGCGTGTTTTAGTGTCCACTGAAGAGAATGTTGTGGCTTCACTCGACCTTCGTCATGGAGAGATTTTTTGGAGGCATGTTCTTGGCACCAATGACGTTGTTGATGGAATTGACATTGCCCTCGGAAAATATGTCATTACTCTTTCCTCTGGTGGGAGTATATTGAGAGCATGGAACTTACCTGATGGGCAGATGGTTTGGGAGTCTTCCCTTCATGGATCAAAGACATCAAAGTCAATATTAAACATTCCAAAAAATTTGAAATCTGACAAGGATGATACGATCCTTGTTTTTGGTAAAGGGTGTCTCAATGCCATTTCTAGCATAGACGGTGAAGTTCTCTGGAAGAAAGATTTCGCTGGTGAGAGCATTGAAGTTAGCCATATTATTCCGTCTCCCGAAGTGATCTATGTAGCTGGTTTTGTTGGTTCTTCAAAGTTTTATGTGTATGAATTGGATGCTAAGAGTGGAGAGTTGTTAAAGAATAATCATATAGCACTTCCCTTTGGAACTTCTGGGGAATCATTATATGTCCCAGGTGATAAGTTTTTGGTATTGGATGATGCAAGGTCAAAGATAGTAACAATAAACATCAACAATGGAGATATTAACTACAACCAGAAGCTAATTTCAGACCTCATCAAGGATTCGTCTGGGCAGGCAGTAATATTACCATCAACACTTCCAGGACTGTTCGCATTAAAAATCAATTCCCAATTTCTTTTAATTAAAGTGACAAATGAAGGTGAGTTGGCGGTGGTGGACAAAATTGATAATGCAGCAGCTTTTAGCAATGCTCTGTCAATTTCAGAGGATCAACATGTTTTTGCATTTGTCCAATATGAAGACAATAAAATTCACCTCTCAGTAAAGGATGTTAATGATTGGAGTCGTGATTTGCTAAAAGAAAACCTGGTAATAGACTATCAAAGAGGAAACATTGAGAAGATTTTCATAAACAATTATGTCAGGACAGATAGATCTCATGGTTTCAGAGCATTGATGGTAATGGAGGATCATTCACTTCTATTAGTTCAACAAGGAGAAATTGTCTGGAGTAGAGAGGATGGTCTTGCCTCAATTGTTGATGTAACAACATCAGAACTACCAGTGGAAAAGGAAGGTGTATCGGTGGCAAAAGTAGAACAGAACCTATTTGAATGGCTTAAGGGACATGTGCTGAAACTCAAAGGAACTCTAATGATTGCAAGCCCTGAGGATAAAATAGCTATTCAAAAGCTTAGGTTGGGGAGTTCTGAGAAAAGCAAAATGACTCGTGATCATAACGGTTTTCGTAAGTTGCTTATAGTACTTACAAGGGCTGGAAAGGTTTTTGCTTTGCATACCGGGGATGGACACATCGTTTGGTCTATTACGCTTAACACTCTGCGTAAATCAGAGGTGTGCGAACATCCAGTTGGGCTTAACATTTATCAGTGGCAGGTTCCGCATCATCATGCACTGGATGAGAATCCATCTATTCTTGTAATCGGGCGATGTGGACCAAGTTTGAGTGCACCAACTGCTCTTTCTTTCCTTGATGCATACACAGGGAAGGAACTCAATTCTTTGAGTCTTGCTCACACTGTTGCTCGAGTTATTCCTCTGCCTTATACTGATTCAACTGAACAGCGTCTGCATCTTATTATAGACTTTAACAAACATGCATATTTATACCCAAGAACTCCTGAAGCTAGTGAGATTCTGAAACATGAGTTTTCGAATATATACTGGTACTCTGTTGAGGCTGATAATGGTGTTATTAGAGGTCATGCCTTGAAGAGCAATTGCATTCATGAAGTAGTGGATGAATACTGCTTTGTATTCAGGGACTTGTGGTCAATTGTATTCCCATCTGAATCAGAAAAGATTATTGCAACAGTGACAAGAAAATCAAATGAGGTTGTTCATACTCAAGCAAAAGTTATGACTGACCACGATGTCATGTACAAGTATATATCAAAGAATATACTTTTTGTCGCAAATGCAGCACCAAAAGCCAGTGGGGAAATCGGAACAGCAACCCCAGAAGAGGCATTGTTGGTCATCTATATCATTGATACTGTGACTGGTCGCATATTGCATCGCATGACCCATCATGGTTGCCAGGGTCCTGTTCATGCTGTATTTAGTGAAAACTGGGTTGTCTACCACTATTTTAATCTCAGGGCTCACAGACATGAGATGTCAGTTATCGAGGTCTATGACCAGTCTCGAGCGGATAACAAAGATATTTGGAAGTTTGTTCTTGGGAAGCATAATCTTACATCGCCCATCTCTTCTTACTATCGACCAGAAATCTCAGCAAAATCACAATCATACTTCTTTACTCACTCTGTGAAAGCCATCGAAGTGACTTCAACTGCTAAGGGTATAACCTCTAAGCAGCTTCTTATTGGAACAATTGGTGATCAGGTTTTGGCACTTGATAAACGATTTTTGGATCCTCGGAGGACTCTCAATCCCTCACAAGCTGAGAAAGAAGAAGGAATTATTCCTCTTACCGATTCATTGCCAATCATTCCTCAGTCCTATATTACACATTCCCTAAAAGTAGAAGGTCTGCGAGGTATAGTAACAGTGCCTGCCAAATTGGAGTCTACATCCCTCGTCTTTGCCTATGGAGTAGATCTATTTTTTACTCAGATTGCTCCTTCTAGGACTTACGATTCACTGACTGAAGATTTCAACTATGCTCTACTTCTTCTAACAATTGTTGCACTTGTAGCAGCATTATTTATTACTTATGTATTATCGGAGAGGAAAGATCTACAAGAGAAATGGAGATGA 2952 0.3997 MAMAIRVFLSFLLFLSLTNLASSLYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVLVSTEENVVASLDLRHGEIFWRHVLGTNDVVDGIDIALGKYVITLSSGGSILRAWNLPDGQMVWESSLHGSKTSKSILNIPKNLKSDKDDTILVFGKGCLNAISSIDGEVLWKKDFAGESIEVSHIIPSPEVIYVAGFVGSSKFYVYELDAKSGELLKNNHIALPFGTSGESLYVPGDKFLVLDDARSKIVTININNGDINYNQKLISDLIKDSSGQAVILPSTLPGLFALKINSQFLLIKVTNEGELAVVDKIDNAAAFSNALSISEDQHVFAFVQYEDNKIHLSVKDVNDWSRDLLKENLVIDYQRGNIEKIFINNYVRTDRSHGFRALMVMEDHSLLLVQQGEIVWSREDGLASIVDVTTSELPVEKEGVSVAKVEQNLFEWLKGHVLKLKGTLMIASPEDKIAIQKLRLGSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGHIVWSITLNTLRKSEVCEHPVGLNIYQWQVPHHHALDENPSILVIGRCGPSLSAPTALSFLDAYTGKELNSLSLAHTVARVIPLPYTDSTEQRLHLIIDFNKHAYLYPRTPEASEILKHEFSNIYWYSVEADNGVIRGHALKSNCIHEVVDEYCFVFRDLWSIVFPSESEKIIATVTRKSNEVVHTQAKVMTDHDVMYKYISKNILFVANAAPKASGEIGTATPEEALLVIYIIDTVTGRILHRMTHHGCQGPVHAVFSENWVVYHYFNLRAHRHEMSVIEVYDQSRADNKDIWKFVLGKHNLTSPISSYYRPEISAKSQSYFFTHSVKAIEVTSTAKGITSKQLLIGTIGDQVLALDKRFLDPRRTLNPSQAEKEEGIIPLTDSLPIIPQSYITHSLKVEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSRTYDSLTEDFNYALLLLTIVALVAALFITYVLSERKDLQEKWR 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05419 983 PANTHER UNCHARACTERIZED 2 983 IPR026895 GO:0072546
Trre5g05419 983 Pfam ER membrane protein complex subunit 1, C-terminal 765 982 IPR011678 -
Trre5g05419 983 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 54 513 IPR011047 -
Trre5g05419 983 FunFam Os05g0230600 protein 32 338 - -
Trre5g05419 983 Gene3D - 46 345 IPR015943 GO:0005515
Trre5g05419 983 Pfam PQQ-like domain 52 132 IPR002372 -
Trre5g05419 983 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 487 815 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05419 Trre-Chr5 54892246 54900411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05419 K23562 - gmx:100790095 1717.59