Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05417 ATGGGATCGTCCTTTATCCAGATTGACTCCATCTCTATTGATCTTGCCAATCCTATTGGTAAGAGGGATGCAGGCAAATGTGAACATTTCTCAATACGTGAATATGTCTCAGAAGTTCGGAAAAAAGACTGGAAACTTTGTTGGCCATTTCCAATAGATGAGTCTGACAAGCAACCGTCATTTCCACCGTTAGATGTGCCAAAACACATATGTTGCAGATATTCAAACTCTCAACATGAAAATGCTGCTAAAGACATTCCTAAAGATAACCAAATAGACTTTACTTGTCCTAGTTCCAGAGGCAGATCTGATACTAACTGTAGTAATGCAGTTCTCGAACCTTTTATTCAGAAAGATCCGATATCTGACATTATTGTGAGAAGAGACATTGATCTCAATACAAACCTGAGCAGTGTCGATGGTTTCATACCAGTTAGTATTGAGAAAGAAAACAAAGGCGGAGTTGGACTCAGCAGCAGAATCGACCTTGAGAATGGATTGGAGGATAATCTCAATCACCAAGTAACTAGTTCTCTATCACCTAAAATTTATCCAGGCCTTGCACAAGAAGTGAGCACAACTAAAAGAGGCGGTGAAAGTAGTGGAGTTTCTTATGTTCAGCTTGCTAACAATCTTGAATGCACGGATAAGAATTCTTCTGAGATTTGTAATGGGGGGACAGCTTCTAAAGATAACCAATGCATGAAAGATTTAGTAACAACGGCCATGGAGGCAGATAATAAATATGATCACACAACTGGACCACCTACTGAATCATTTGATTGTAATCATGCTGTGCCTGCAGGAAGTATAGACAACATGGTTGAAGACGATTTTGACGATAATCATTCAGAAAAATCCAGTAGTTTGTCTCGTAGGAGACCTCGGAAGGTGCGTTTGATGGCAGACTTGTTGCGTGAAAATGGTGAATTGAAGGCTGGAAAAGTTGCCGTACAAGAATCCACATCCCACAGTACTTCCAATACTTCTGCAGCTTCGCAGGCACGTTCATTTTTCCAAGGAAAGGTGGATATTCAAGGAGATATGACTTTAACAAATATGAGTCAGAGTAGAAAAAGGAAAATTATCGTGGATGAAGTACGGAGTATGGAAAGTATGCGTTTTCAGAGGGCTGGAGTTGAAGCTCAAAACTTAGAGGGGATTGCAAAAACAACTGACACAGTGTTCAATAAGAGATCCAATTCCAAAGATGTACTAGCAGGGACTGGTTTACAAGTTGCTGAGAAAGGAAACTGGAGTAAATCTGAACATGAAAGAAGCCATATTGTGGGTAAGAAGAAGAACAAAAAGAATCAAGTTGTAGACAATTACTTGATTCCTGAGCTACAACAAGGACAGAGAAAACAAAATGAGGACACTGTGTATACTACAGATAAGGCATATGTATCTAAAACTGTTTCTTCTAGTTTAACTCCTATGTTCACAAGAAAAGGAGTGGATAACTTTCCTTTCTACACCCCAAGAATAGAAAATGATTTCAATTCATACAAAGAAAAGGGGAAAATGCTGCAAACCGATGAAGAACTCAATTCTTTTTCTTGCAACAGAAATGATATGCTTGTCAGAGATTCGTTTGCATATTCAGGGGTGAAAATCAGATCTAGTGTTCCTGCAGATGTTCCAATTCCTTTGGACCAAGGAATGATGAATGGAAAAGGACCGGAGGAGGGTTTGCATCTTTCTTTGAACAGTTATATGTCAGAACATGGTTACAACAAGAAATGTATCCATCAAATAGAAAACCACCTTCCCTTCTCATTGCCATTTCAAGAGAGCACTTCAAGAGTACCTCAGTTTAATAGAAAAGACAGTGAAACCAATGTTTTTGGAGGACCAAGCATTCCTTCCAGGCACACAACAAACACTATTTCTGGAAAAGAAGTTCACTGTAAAGAAATTATTGGTGCAAGAAACACAGGAAAAACTGTTGAAGCTGTGGAACAACTAGGTATTAAGAAAAGATACAATGAACAAGCTGCTGAGGTGTCTGAGCAGGGAACACTAGATGACATACCAATGGAAATTGTGGAACTCTTGGCAAAGAATCAGTATGAGAGGTGTCTCCCTGACGTAGAAAATAGATGCTCAATGTTTGAAAAATCCTCTATCAATAGGAACGCACAGATGACAGCTGGTACTGCTGTTTATGGCAAAGGGAAGATGAGCATGTTAAAAGAAGGGAAGAAGGAGAAAACAAGAGGAAGACCTAGGAAAAATAACACGGTCACAAGAGGAGAGAATGTGAAACCTAACAAAAGAAAGCCAAATCATTACTTTTCTCCATTTGATGGAAGTAATTTGGGAGTGAATAATCCATATCCACCTCAACCCTCCTTCGGATTTGATGTTCCTCAATCCCAAACAAAGCAGTCAAATGGATTCCAGTTTTCACCTATGATTTCTAACCAGCTTGGTGGTGCACGAAATATCAAGTTTAATGGGAGTCTCGAAGAGCGCGTTTCCTCTAACGCTACTTTGCAACCCCTGGGAGGATGTAGCTTACATAAGAATATATTACAGCAGGATAATGAAGCTTCTCGCATTTGGGCATCCTTGACCCCAAACCACTCTTCCTTAGGGTATGATGTATCACAAAAGGTTGTTTCTCAACCTAGTAGTAGCAACATGGACACATCTTCACCCCGGTCTGGTGCAGTACATAAACAGAACATGAGGAGGGACTTTGATCTTAACCACACAAATATCAATGCTACAGGCCAAGAAAAGCATAGTAGGAACACAGGTCCTGGAGTCTTCAACAGGGTGAATGGAGAATACCCATTTCCATGCAAACATAATGGAATGGAGCCTCATCAAAATTTGAGGGGATCTTTGGATTTGTATTCTAATGAGACAATACCTGCCATGCATTTACTTAGCCTTATGGATGCAGGCATGCAGTCCCGTACACCCTTCAATGTCGGTGTTAGTGCTCAAATGCTCAAAAGACCCTCTTATCCTGGTGATTGCAATACCAAGTTGGAGATAGGTGCATCTAAGGCCAATGGTACCTTGAAACGGCAGCCATCTGACTATTACAACAGAAGTTACTTACCGGATAAACCCCATGGCTGTTTTATTGGCTCTCAAACCTTCGGCGCGTCTTCATCAGCCCAGCATGGTAATAAGTTTATAAAAGATGCTGGTTCCAATGGTCAAAATTCAACAAAGTTTGGAAAGAAAGAAAAGATGAAGAGCTCCAACTCATCCCTTCAGAATAGATTTGTTAAGCAATGTAGCTTAGCTTATAGAGAAACAGACACTTCACTGCAACGTGGATTGGAAGTTCATGGTATTCATACCTCCATGCCGGTAAAGATCACATCTGGCATCTCATGTACGGTAAACAGAAATCCAGCTGAGTTCACTGTTCCGGAAACAGGAAATGTCTATATGATCAGAGGAGAGGATCTGAAATTTGAGAAGAGTTGTCCCAAAAACAAGTACCGTTTCCCTATTCCATGTGGACATAAGCAGCAGAGCAATTTGAAGGGAATGAAAATGAAAGAACATTCAAAACACTGA 3546 0.4024 MGSSFIQIDSISIDLANPIGKRDAGKCEHFSIREYVSEVRKKDWKLCWPFPIDESDKQPSFPPLDVPKHICCRYSNSQHENAAKDIPKDNQIDFTCPSSRGRSDTNCSNAVLEPFIQKDPISDIIVRRDIDLNTNLSSVDGFIPVSIEKENKGGVGLSSRIDLENGLEDNLNHQVTSSLSPKIYPGLAQEVSTTKRGGESSGVSYVQLANNLECTDKNSSEICNGGTASKDNQCMKDLVTTAMEADNKYDHTTGPPTESFDCNHAVPAGSIDNMVEDDFDDNHSEKSSSLSRRRPRKVRLMADLLRENGELKAGKVAVQESTSHSTSNTSAASQARSFFQGKVDIQGDMTLTNMSQSRKRKIIVDEVRSMESMRFQRAGVEAQNLEGIAKTTDTVFNKRSNSKDVLAGTGLQVAEKGNWSKSEHERSHIVGKKKNKKNQVVDNYLIPELQQGQRKQNEDTVYTTDKAYVSKTVSSSLTPMFTRKGVDNFPFYTPRIENDFNSYKEKGKMLQTDEELNSFSCNRNDMLVRDSFAYSGVKIRSSVPADVPIPLDQGMMNGKGPEEGLHLSLNSYMSEHGYNKKCIHQIENHLPFSLPFQESTSRVPQFNRKDSETNVFGGPSIPSRHTTNTISGKEVHCKEIIGARNTGKTVEAVEQLGIKKRYNEQAAEVSEQGTLDDIPMEIVELLAKNQYERCLPDVENRCSMFEKSSINRNAQMTAGTAVYGKGKMSMLKEGKKEKTRGRPRKNNTVTRGENVKPNKRKPNHYFSPFDGSNLGVNNPYPPQPSFGFDVPQSQTKQSNGFQFSPMISNQLGGARNIKFNGSLEERVSSNATLQPLGGCSLHKNILQQDNEASRIWASLTPNHSSLGYDVSQKVVSQPSSSNMDTSSPRSGAVHKQNMRRDFDLNHTNINATGQEKHSRNTGPGVFNRVNGEYPFPCKHNGMEPHQNLRGSLDLYSNETIPAMHLLSLMDAGMQSRTPFNVGVSAQMLKRPSYPGDCNTKLEIGASKANGTLKRQPSDYYNRSYLPDKPHGCFIGSQTFGASSSAQHGNKFIKDAGSNGQNSTKFGKKEKMKSSNSSLQNRFVKQCSLAYRETDTSLQRGLEVHGIHTSMPVKITSGISCTVNRNPAEFTVPETGNVYMIRGEDLKFEKSCPKNKYRFPIPCGHKQQSNLKGMKMKEHSKH 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05417 1181 MobiDBLite consensus disorder prediction 732 775 - -
Trre5g05417 1181 PANTHER PROTEIN EMBRYONIC FLOWER 1 3 1177 IPR034583 GO:0009910|GO:0045892|GO:0048367
Trre5g05417 1181 MobiDBLite consensus disorder prediction 276 295 - -
Trre5g05417 1181 MobiDBLite consensus disorder prediction 743 760 - -
Trre5g05417 1181 MobiDBLite consensus disorder prediction 247 295 - -
Trre5g05417 1181 MobiDBLite consensus disorder prediction 1053 1076 - -
Trre5g05417 1181 MobiDBLite consensus disorder prediction 1162 1181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05417 Trre-Chr5 54868246 54872961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05417 - - gmx:100813480 1484.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05417 5 54868246 54872961 Trre5g05417 5 54868246 54872961 ECH