Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05407 ATGGTCTTCTACTTCAAAGCTCGCCCTGAAGCTGGCGATTACACCATCTTCATGGGTCTTGACAAGTTCGAGAACGAAGAACTCATCAAATATGGTTTCATCGAAGACATTTGGTTCCATGTTGATAAGATGTCTTCAGCTCATGTTTATGTGAGGCTGCACAGAGGTCAGACTATTGATGACATGAGTGAAGGTTTATTGGAAGACTGTGCTCAACTTGTCAAAGCAAATTCAATTCAGGGGAATAAAGTAAACAACGTTGACGTTGTTTACACTCCCTGGTCCAATTTAAAGAAAACTGCTTCAATGGACGTTGGTCAAGTTGGTTTTCACAACTCAAAAATGGTGCGAACTGTGAGAGTTGAGAAGAAGATAAATGAGATTGTTAACAGGCTAAACAAGACGAAGGTGGAAAGAAAGCCTGATTTGAAAGCTGAGCGAGAAGCAGTGAATGCAGCTGAAAGGGCTGAGAGAAAACATCAACTGAGAGAAAAGAAACGCCGTGAGGAAATGGAAAGACTTGAAAAGGAGAAACAATCAGAGCTTAGGAGCTACAAGGGTTTGATGGTTGCAGAAAAAATGACATCCAACAAAGATATTGCATCAGGAAGCAAATCATTCCAGGAAGTGGAGGAGGATTTCATGTAA 648 0.4105 MVFYFKARPEAGDYTIFMGLDKFENEELIKYGFIEDIWFHVDKMSSAHVYVRLHRGQTIDDMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVRVEKKINEIVNRLNKTKVERKPDLKAEREAVNAAERAERKHQLREKKRREEMERLEKEKQSELRSYKGLMVAEKMTSNKDIASGSKSFQEVEEDFM 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05407 215 PANTHER DUF814-RELATED 1 215 IPR039730 -
Trre5g05407 215 Pfam NFACT protein RNA binding domain 1 112 IPR008532 -
Trre5g05407 215 Coils Coil 153 184 - -
Trre5g05407 215 MobiDBLite consensus disorder prediction 194 215 - -
Trre5g05407 215 MobiDBLite consensus disorder prediction 143 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05407 Trre-Chr5 54774397 54777579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05407 K26405 - gmx:100802228 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05407 5 54774397 54777579 Trre5g05407 5 54774397 54777579 ECH