LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre5g05398	ATGAACAATAATAACAACCAGAAATTGTCTTCAACAACGCCTTCACAGGTCCATGAACAACGCGTGTTTGTTCATGGACCTGTGATCGTTGGAGCCGGTCCATCAGGATTAGCGGCAGCAGCATGTCTCAAAGAAAAAAACATTCCATGTATAATTCTAGAAAGATCTAATTGCATAGCTTCATTATGGCAACTCAAAACCTATGATCGATTACGTCTTCATCTCCCGAAACAATTTTGTGAATTACCCTTCATGGAATTCCCTTCAAATTTCCCAACATACCCTTCAAAGCAACAATTCATAAAGTACTTGGAAGATTATGCGGAAAGTTTCGGAATTAGCCCGCGGTTTAATGAGACAGTAAAAAATGCGGAATTTGATAGTAAAATTGGTTGTTGGAGGTTGAAAAGTTTTAGTAGTAAAGGCGATTTAACGACGGAATATGTTTGTCGGTGGTTGATCGTTGCGACCGGGGAGAATGCCGAGGCTGTTGTGCCTAATATTGAAGGTGTTGATGAATTTGATGGGATTATAAGACATACAAGTTTGTATAAAAGTGGTGAAGAGTTTAGAGGGAAAAGAGTTTTGGTTGTTGGTTGTGGTAATTCAGGTATGGAAGTTTGTTTGGATCTTTGTAACCATGATGCTACTCCTTCTCTTGTTGTTAGAGATTCAGTACACGTTCTACCACGAGAGATGCTAGGAAAATCAACTTTTGGATTGTCCATGTGGTTACTTAAATGGTTTCCATTGAGACTTGTCGATAAGTTCTTGCTCATAGTGTCATGGCTTATGCTTGGTGACACTTCCCAACTTGGGTTGGATCGTCCTAGTTTGGGTCCCCTTCAACTCAAAAACCTCTCCGGTAAAACTCCTGTCTTAGATGTGGGTACCCTTGCCAAGATTAAAAGTGGACACATTAAGGTACGACCAAGCATAAAGCGGTTAAAACGTCACACAGTGGAGTTCGTAGATGGAAGGTCAGAGAATTTTGATGGTATCATATTGGCAACTGGTTACAAAAGCAATGTACCCTATTGGCTCAAGGAAGAGGATATGTTCTCTAAGAAAGATGGATTTCCTATGAAGCCATTTCCAAATGGATGGAAAGGTAAAAATGGACTCTATGCAGTAGGTTTTACAAAAAAGGGACTATTAGGTGCATCTATGGATGCCAAAAGAATAGCTGATGACATTGAACGGTGTTTAGAAGCTGAAAAATAA	1224	0.3979	MNNNNNQKLSSTTPSQVHEQRVFVHGPVIVGAGPSGLAAAACLKEKNIPCIILERSNCIASLWQLKTYDRLRLHLPKQFCELPFMEFPSNFPTYPSKQQFIKYLEDYAESFGISPRFNETVKNAEFDSKIGCWRLKSFSSKGDLTTEYVCRWLIVATGENAEAVVPNIEGVDEFDGIIRHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHDATPSLVVRDSVHVLPREMLGKSTFGLSMWLLKWFPLRLVDKFLLIVSWLMLGDTSQLGLDRPSLGPLQLKNLSGKTPVLDVGTLAKIKSGHIKVRPSIKRLKRHTVEFVDGRSENFDGIILATGYKSNVPYWLKEEDMFSKKDGFPMKPFPNGWKGKNGLYAVGFTKKGLLGASMDAKRIADDIERCLEAEK	407

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre5g05398	407	PRINTS	FAD-dependent pyridine nucleotide reductase signature	194	212	-	-
	Trre5g05398	407	PRINTS	FAD-dependent pyridine nucleotide reductase signature	27	46	-	-
	Trre5g05398	407	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	28	402	-	-
	Trre5g05398	407	FunFam	Flavin-containing monooxygenase	27	407	-	-
	Trre5g05398	407	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	26	48	-	-
	Trre5g05398	407	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	190	214	-	-
	Trre5g05398	407	Pfam	Flavin-binding monooxygenase-like	29	347	IPR020946	GO:0004499\|GO:0050660\|GO:0050661
	Trre5g05398	407	Gene3D	-	27	407	IPR036188	-
	Trre5g05398	407	SUPERFAMILY	FAD/NAD(P)-binding domain	191	403	IPR036188	-
	Trre5g05398	407	SUPERFAMILY	FAD/NAD(P)-binding domain	28	231	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre5g05398	Trre-Chr5	54652495	54661335	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre5g05398	K11816		-	gmx:100799546	692.575