Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05396 ATGGAGTACTCTCTCCTATCCGTTTTTATGATACTCAATCTTGTGTTGGTTGCAGCTCATGGTGCTTTATCTCCTGAACTTTACTGGAAGTTTGTGCTTCCAAGTACGCCAATGCCAAAAGCCATAACTAATATCCTGCACTTTGATTGGATAGAAGACAAAAGCACAAATGTTGGTGTAGGAAAAGGTGGTGTACGTGTTCATACAAGCAAAGAAAAACACAAAGAAACCTCAGTGAATGTTGGAAAAGGAAGTGTAAATGTTCATGCAGGAAAAGGTACTAATGTCAATGTTGGTGGAGTAGGAGGAAAACCAGTAACTGTTATAGTTGGTCCACATTCTCCTTTTGCTTATAGATATGCTGCCACAGAGACACAAATACATGATGAAAACAAAACAACATTATTCTTCTTTGAAAAGAATTTGCATCCTGGAACAAAAATACACTTGAACTTCATTCAAAGCTCAAATGAAGCCAAATTCGTCTCTCGACAAGTTGCGGACGCGACGCCATTTTCATCTGAAAAATTGAATGATATTTTTAATAAATTTTCTATTAAACCTGAGTCAGAAGAAGCTCATATCATGAAGAATACTATTAAGGAGTGTGAAGATGCAAGTATTCAAGGTGAGGAAAAATATTGTGCAACTTCACTTGAATCTATGGTTGATTTTAGTACTTTGAAGCTTGGAAAAAGTGTTAAGGTTGTTTCTACTGTGGTAGAGAAAAAGAGTATAGGGTTGCAGAAGTATACAATGAAATCAGGAGTGAAAAAGTTAGCTGCAGGGGACAATGCTGTTGTGTGTCACAAACAAAATTATCCATATGCTATATTTTATTGTCATAAAACAGAGAACACAAGAGCTTATTTTGTTCCATTGGAGACTGATAATGGGATTAGAGTTAAAGCTGTAGTGGTATGTCACACAAATACATCAAAATGGAATCCTAAACATATTGCCTTTAAAGTGCTTAAAATTAAGCCAGGGACTATTCCAATATGCCACTTTCTTCCTGAGGATCACATTGTTTGGGTTCCCAATAATAATTAG 1053 0.3599 MEYSLLSVFMILNLVLVAAHGALSPELYWKFVLPSTPMPKAITNILHFDWIEDKSTNVGVGKGGVRVHTSKEKHKETSVNVGKGSVNVHAGKGTNVNVGGVGGKPVTVIVGPHSPFAYRYAATETQIHDENKTTLFFFEKNLHPGTKIHLNFIQSSNEAKFVSRQVADATPFSSEKLNDIFNKFSIKPESEEAHIMKNTIKECEDASIQGEEKYCATSLESMVDFSTLKLGKSVKVVSTVVEKKSIGLQKYTMKSGVKKLAAGDNAVVCHKQNYPYAIFYCHKTENTRAYFVPLETDNGIRVKAVVVCHTNTSKWNPKHIAFKVLKIKPGTIPICHFLPEDHIVWVPNNN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05396 350 SMART BURP_2 134 348 IPR004873 -
Trre5g05396 350 ProSiteProfiles BURP domain profile. 136 348 IPR004873 -
Trre5g05396 350 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 18 348 IPR044816 -
Trre5g05396 350 Pfam BURP domain 135 347 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05396 Trre-Chr5 54630122 54632218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05396 - - gmx:100799031 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05396 5 54630122 54632218 Trre5g05396 5 54630122 54632218 ECH