Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05392 ATGCAGAGTTTGCAAGAGAAGGCTTCTGAATGGAGTGGTGTTGAGACAGAAGATGCTTTTGCAATAGATGACACCAATAATTTGTTTCAAAAACTTGGTGGCCTTGAAACTTTTATTAACCTTTCCACCAATTTCTACAACAGAGTGTATGATGACGATGAAGAGTGGTTTCGTTCAATATTTGGCAAGTCTGATAAAGATAAAGCAATTCAAAACCAATATGAATTCCTAGTCCAGAGATTAGGAGGCCCTCCTCTCTATTCTCAAAGAAGAGGACATCCTGCTCTAATTGCTCGACATCGACCATTTCATGTGACACATGAAACGGCCGAGAGGTGGTTACATCACATGCAACATGCATTGGACAACACTTCACATATAGATTATGATTCCAAGATCATGTTGATGAACTTTTTCAGGCACACTGCATATTTTCTTGTGGCTGGAATTGAGCAAAAGAATCAAAGCCTTCATCCTTGCAAGGATGCACCTGGAAGGCACCCATGTACAAACTTTTAG 519 0.4008 MQSLQEKASEWSGVETEDAFAIDDTNNLFQKLGGLETFINLSTNFYNRVYDDDEEWFRSIFGKSDKDKAIQNQYEFLVQRLGGPPLYSQRRGHPALIARHRPFHVTHETAERWLHHMQHALDNTSHIDYDSKIMLMNFFRHTAYFLVAGIEQKNQSLHPCKDAPGRHPCTNF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05392 172 CDD TrHb2_AtGlb3-like_O 34 148 - -
Trre5g05392 172 Gene3D Globins 1 153 IPR012292 GO:0019825|GO:0020037
Trre5g05392 172 Pfam Bacterial-like globin 27 144 IPR001486 GO:0019825
Trre5g05392 172 PANTHER TWO-ON-TWO HEMOGLOBIN-3 1 159 IPR044203 GO:0005344|GO:0015671
Trre5g05392 172 SUPERFAMILY Globin-like 27 147 IPR009050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05392 Trre-Chr5 54594768 54596276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05392 - - tpra:123898068 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05392 5 54594768 54596276 Trre5g05392 5 54594768 54596276 ECH