Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05385 ATGCCTGAGACTGGGGTTAATTCAACTTTCAGCAAGTCAACTGGATTGCCTCGAAAGCGCTTCTATCGTGCACGAGCGCACAGCAATCCACTCAGTGACTCTCACTTCCCAGTGCCGTTGTCACCCAGTCATATTGACTATTCCCTCCATTATCCTCATTTCTTTCCCTCATCTGATCAAGCTGATAGTTCCAAAAAGATCAAGTTTGCTGATATTGGCTGTGGTTTTGGAGGGCTGCTCATTAGTCTTTCCACTCTGTTCCCAGAAACACTGATGATTGGAATGGAACTTAGAGATAAAGTGTCCGAGTATGTCAAGGAACGGATTTTATCTTTAAGGGTAGCAAATCCAGGTCAATACCAAAATATTTCTGTTGTTCGGACTAACTCCATGAAGTACATTCCCAATCACTTCGAGAAAGCACAACTCTCGAAGATGTTTTTCTTGTTTCCTGATCCTCATTTTAAAGAGAAGAACCATCGCCGTAGGGTTATCAGCCCATTCTTACTAGATGAGTATGCTTTTGTTCTTGAGGTTGGTGGAATTATATACACAATAACAGACGTCGAAGAACTTGGGGACTGGATGAAGTCTTGTTTGGACAATCACCCTTTGTTTGAACCGTTGACTGAGAAAGAACTTGAAGCAGATCCGGCTGTTAAGCTTTTAAGCTCTGCTACTGAAGAAGGCCAAAAGGTTGCTAGAAATGATGGACAAACTTTCCAGGCTGTACACAGACGCATCGCGGCATCTGATCAAATATCTTAG 768 0.4284 MPETGVNSTFSKSTGLPRKRFYRARAHSNPLSDSHFPVPLSPSHIDYSLHYPHFFPSSDQADSSKKIKFADIGCGFGGLLISLSTLFPETLMIGMELRDKVSEYVKERILSLRVANPGQYQNISVVRTNSMKYIPNHFEKAQLSKMFFLFPDPHFKEKNHRRRVISPFLLDEYAFVLEVGGIIYTITDVEELGDWMKSCLDNHPLFEPLTEKELEADPAVKLLSSATEEGQKVARNDGQTFQAVHRRIAASDQIS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05385 255 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 19 243 IPR003358 GO:0006400|GO:0008176
Trre5g05385 255 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 16 247 IPR003358 GO:0006400|GO:0008176
Trre5g05385 255 Pfam Putative methyltransferase 67 242 IPR003358 GO:0006400|GO:0008176
Trre5g05385 255 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 60 215 IPR029063 -
Trre5g05385 255 FunFam tRNA (guanine-N(7)-)-methyltransferase 45 247 - -
Trre5g05385 255 NCBIfam tRNA (guanosine(46)-N7)-methyltransferase TrmB 64 247 IPR003358 GO:0006400|GO:0008176
Trre5g05385 255 Hamap tRNA (guanine-N(7)-)-methyltransferase [METTL1]. 16 248 IPR025763 GO:0008176
Trre5g05385 255 CDD AdoMet_MTases 68 186 - -
Trre5g05385 255 Gene3D Vaccinia Virus protein VP39 45 247 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05385 Trre-Chr5 54565805 54566572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05385 K03439 - gmx:100806128 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05385 5 54565805 54566572 Trre5g05385 5 54565805 54566572 ECH