Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05383 ATGGCGCCTTCGAAGCTTTTCTTCTTCGCTCTTTCCTTTGCCCTATTTTTCTTCATCGTTACTTCCGAAGCAGATGTTTCCATCCAAGATTCCGATTCCTCTTCTCTTAAGATCCAATTAGATCAACTCAACTCCAAGATCCAATTTCTCGAGTCTCAAATCAGTGACAAATCACAAGAGTTGAAGAAGAAGGATGAAACAATAGCAGAAAAAGAAAAACTATTACAAGATAAGTTGAGTAGCATTCAATCCTTGCAGAATGAGGTTGATTCTCTTCAGAAAAAAGGATCATTGGATGTTGAAGAGCGGGTTGAAAAGGCGCATGCACGTGCTGGGGAACTACAAAAGCAGGTGGACAAGCTTAAAAGCCAACTTGAAACACAAAACAGTGAGAAAGTGAATTGGGAAACTCGGGTTGAAAACTTAGAGAAAAAGATTCACGATTTGAACTCAAAATTAGAGGATGTTCAAAAGATAAATGAGGAACAGAAGAAACAAATCCGTAAAACTGAACGCGCTCTTAAAGTTGCCGAGGAAGAAATGCTTAAGGCAAAGCTCGAGGCAACTTCCAAAGCAAAAGAGCTGAGCGAGACTCATGGTGCTTGGCTTCCTCCTTGGCTTGCTGTACACTATATTCGTAGTAAGTCCGTGGTTGAGACTCGTTGGAATGAACATGGGAAGCCTCTATTGGAAGTGATATCTCAAAAGGCCCTAGAGAAAAAGGCACAAGCTGGAAAGTGGGCTGAACCTCATGTCGAAACAATTAAAACCAAATGGGTTCCAGCTGTGAAAGAACAGTGGTCTGTGGTGAAAACAAAGGCTGAACCTCATGTGCAATTACTGACTACAAAAACTGTTGAAGTTTACAAGTCCTCAAAGGACACACTTACTCCCCACTTGAACAAGGCAATAGAATGTGTAGATCCTTATTATCAGGAAGCTCGAAAGTTTAGCAAGCCATACATTGATCAGGTTGCTACTGCTGCTAGACCTCATGTTGAGAATGTACAAGTTGTTCTGAAGCCCTACACAAAGAAGGTTGTTCATGCTTATGGGAATTTCTTGGAATCAGCCACTGCATATCATAGCCAGGTACAAGCTACTGTCCAGGAGACACTGAAAAAGCACGAGCTTACCAGACCTCTTGCAACTAAGGAATTGGAATGGTTTGCGGCCTCTGCCCTTTTGGCCTTGCCTATTATTTTACTAGCTAGAGTTTTTTCTGCCATTTTCTGCAAAAAGGCGACTAAACCCGCTCGAAGCGGAAACACCCACCATTCTCGTCGTAAAGCTAAGCGAGGCCATTCAGACAGGTAG 1317 0.4244 MAPSKLFFFALSFALFFFIVTSEADVSIQDSDSSSLKIQLDQLNSKIQFLESQISDKSQELKKKDETIAEKEKLLQDKLSSIQSLQNEVDSLQKKGSLDVEERVEKAHARAGELQKQVDKLKSQLETQNSEKVNWETRVENLEKKIHDLNSKLEDVQKINEEQKKQIRKTERALKVAEEEMLKAKLEATSKAKELSETHGAWLPPWLAVHYIRSKSVVETRWNEHGKPLLEVISQKALEKKAQAGKWAEPHVETIKTKWVPAVKEQWSVVKTKAEPHVQLLTTKTVEVYKSSKDTLTPHLNKAIECVDPYYQEARKFSKPYIDQVATAARPHVENVQVVLKPYTKKVVHAYGNFLESATAYHSQVQATVQETLKKHELTRPLATKELEWFAASALLALPIILLARVFSAIFCKKATKPARSGNTHHSRRKAKRGHSDR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05383 438 Coils Coil 33 95 - -
Trre5g05383 438 SUPERFAMILY Apolipoprotein A-I 187 371 - -
Trre5g05383 438 Gene3D - 24 202 - -
Trre5g05383 438 MobiDBLite consensus disorder prediction 419 438 - -
Trre5g05383 438 PANTHER OS08G0519400 PROTEIN 13 433 - -
Trre5g05383 438 Gene3D Apolipoprotein 227 387 - -
Trre5g05383 438 Coils Coil 104 194 - -
Trre5g05383 438 SUPERFAMILY Tropomyosin 28 198 - -
Trre5g05383 438 MobiDBLite consensus disorder prediction 418 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05383 Trre-Chr5 54550065 54554296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05383 - - gmx:100781922 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05383 5 54550065 54554296 Trre5g05383 5 54550065 54554296 ECH