Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05376 ATGGAATGGAAGAAGTGTTATTTGGATGTGATATTGGTGCCATTAGCAATTATTTTAACCATTAGTTACCATGTTTGGCTTTGGTATAATGTTAGAACTCATCCACATACAACTATCATTGCCATCAATGCCAGTGGTAGAAGGAATTGGGTTTCTGCCATGATGAAGGACAATGAGAAGAAAAACATCCTAGCAGTTCAAACACTAAGGAACACACTAATGGGTTCAACACTAATGGCCACAACCTCTATTCTCCTGTGTTCAGGTTTAGCAGCAATAATAAGCAGCACTTACAGTGTTAAAAAGCCACTCAATGATACAGTGTATGGAGCACATGGAGAATTTATGGAAGCACTTAAATATGTCACTCTTCTCACTATCTTCTTATTCTCATTCTTTTGTCACTCTTTATCAATAAGGTTTATAAATCAAGTGAACATTCTTATCAACACACCACAAGATCCAATGTCATTGGTGACTCCATCATATGTTAGTGAAATATTGGAGAGAGGTTTCACTTTAAACACTGTTGGAAATAGACTTTTCTATTCAGCACTTCCTCTGTTGTTGTGGATATTTGGTCCTGTTTTGGTTTTCCTCTGTTCTCTCACTATGGTTCCTTTGCTTTATAACCTTGACTTTGTGGTCACTACTAAGGGAAAGATGGACCCAAATGAGAACAGGGATTTTGTTTGA 696 0.3707 MEWKKCYLDVILVPLAIILTISYHVWLWYNVRTHPHTTIIAINASGRRNWVSAMMKDNEKKNILAVQTLRNTLMGSTLMATTSILLCSGLAAIISSTYSVKKPLNDTVYGAHGEFMEALKYVTLLTIFLFSFFCHSLSIRFINQVNILINTPQDPMSLVTPSYVSEILERGFTLNTVGNRLFYSALPLLLWIFGPVLVFLCSLTMVPLLYNLDFVVTTKGKMDPNENRDFV 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05376 231 PANTHER - 1 224 - -
Trre5g05376 231 Pfam Protein of unknown function, DUF599 11 216 IPR006747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05376 Trre-Chr5 54471580 54476384 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05376 - - gmx:100780305 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05376 5 54471580 54476384 Trre5g05376 5 54471580 54476384 ECH
Trre5g05376 5 54471580 54476384 Trre1g00845 1 6410413 6413365 PCT