Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05370 ATGAGCGTGGCTGTGAACAGTGTAGTTGGAGTTGGAGTTGGAGGAGTGAGTACTCAGAATCATAATCATAACGTTTTTGTTTATGGAAGTCTCCTCGCCGATGAGGTTGTCCGCGCTCTCTTGAACCGCGTCCCTCCATCCTCACCTGCTACCCTCTCCGACTACCATAGATTCAAGATCAAAGGTCGCGTTTATCCTGCTATTCTCCCCGTCCAGAGTAAAAAAGTCACCGGCAGAGTTCTTCTTGGAATCTCAGGAGTTGAACTCGATATTTTAGATGAGTTTGAAGATGTTGAATACACTAGAACTGAAGTTGATGTTTTCTTTACGGAGAAGTCTGAAAACTTGCGAGCTTATGCTTATGTATGGAGCAATCCAAATGATCCTGATTTATATGCTGAGTGGGATTTCGAGGAATGGAAAAAAGTTCACATGGATGATTTTGTCAAGATGACTGGTAGCTTCATGGAACAGTTGGAATTGCCAGAATCAAAGCCAAGAGTTCAGGCTTATGAAACCTTCTATAAGCAAGAGAACGATAAGCCACTTGACCCTTGA 558 0.4319 MSVAVNSVVGVGVGGVSTQNHNHNVFVYGSLLADEVVRALLNRVPPSSPATLSDYHRFKIKGRVYPAILPVQSKKVTGRVLLGISGVELDILDEFEDVEYTRTEVDVFFTEKSENLRAYAYVWSNPNDPDLYAEWDFEEWKKVHMDDFVKMTGSFMEQLELPESKPRVQAYETFYKQENDKPLDP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05370 185 Gene3D - 13 129 - -
Trre5g05370 185 PANTHER AIG2-LIKE PROTEIN D 18 168 IPR045038 -
Trre5g05370 185 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 23 145 IPR036568 -
Trre5g05370 185 CDD GGCT_like 25 123 IPR013024 -
Trre5g05370 185 Gene3D - 130 179 - -
Trre5g05370 185 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 25 137 IPR009288 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05370 Trre-Chr5 54440075 54441899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05370 - - mtr:11431538 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05370 5 54440075 54441899 Trre5g05370 5 54440075 54441899 ECH